RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GPR87Q9BY21 358 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 ISCUQ9H1K1 167 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 ACTL8Q9H568 366 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 ZFYVE1Q9HBF4 777 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 ARFGAP3Q9NP61 516 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 ZNF624Q9P2J8 865 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 DNAJC16Q9Y2G8 782 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 TNRC6AQ8NDV7 1962 aaKnown RBP13.96□□□□□ -0.18
CHMP1A-210ENST00000551981 CHUKO15111 745 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 KIF1CO43896 1103 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 DNAJB5O75953 348 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 PDGFAP04085 211 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 HLA-DQB2P05538 268 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 VCLP18206 1134 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 NELFEP18615 380 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 MX2P20592 715 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 IDSP22304 550 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 IL4RP24394 825 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 CD86P42081 329 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 DCDC1P59894 354 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 NIPAL4Q0D2K0 466 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 MMRN1Q13201 1228 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 TUBB3Q13509 450 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 ESPL1Q14674 2120 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 HADHQ16836 314 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 UGT8Q16880 541 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 CCDC183Q5T5S1 534 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 ZNF648Q5T619 568 aaPredicted RBP13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 AGAP9Q5VTM2 703 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 ALS2CLQ60I27 953 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 NCBP2-AS2Q69YL0 99 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 HIST2H2BCQ6DN03 193 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 ADGRG6Q86SQ4 1221 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 TRAM1L1Q8N609 369 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 FAM71BQ8TC56 605 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 RSC1A1Q92681 617 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 GLYATL1Q969I3 302 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 CXorf40BQ96DE9 158 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 FCRL4Q96PJ5 515 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 SLC25A23Q9BV35 468 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 RAB33BQ9H082 229 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 SLC40A1Q9NP59 571 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 CUEDC1Q9NWM3 386 aaPredicted RBP13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 EPHA6Q9UF33 1036 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 SLC23A2Q9UGH3 650 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 ANAPC7Q9UJX3 599 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 RARRES3Q9UL19 164 aa13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 PCDHGA9Q9Y5G4 932 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-210ENST00000551981 VEGFDO43915 354 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 CD48P09326 243 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 RPL10P27635 214 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 RPS15P62841 145 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 PDE1BQ01064 536 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 DPYSL3Q14195 570 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 GPR18Q14330 331 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 KLHL35Q6PF15 583 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 ABRAXAS1Q6UWZ7 409 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 WASH2PQ6VEQ5 465 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 SYVN1Q86TM6 617 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 BPHLQ86WA6 291 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 SIDT2Q8NBJ9 832 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 UBXN4Q92575 508 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 NUP85Q9BW27 656 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 TRIM55Q9BYV6 548 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 HSD3B7Q9H2F3 369 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 WASH6PQ9NQA3 447 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 ACSS2Q9NR19 701 aa13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 NFKBIL1Q9UBC1 381 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-210ENST00000551981 OR52A4PA6NMU1 304 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 ENO4A6NNW6 628 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 SLC4A1P02730 911 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 PTPN4P29074 926 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 HALP42357 657 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 ARL4DP49703 201 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 ACY1Q03154 408 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 GALNT3Q14435 633 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 FILIP1LQ4L180 1135 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 E4F1Q66K89 784 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 PWWP2BQ6NUJ5 590 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 MAP7D3Q8IWC1 876 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 KCTD6Q8NC69 237 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 CCNYQ8ND76 341 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 GPR26Q8NDV2 337 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 SLC41A2Q96JW4 573 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 BTBD6Q96KE9 485 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 ZNF830Q96NB3 372 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 ZNF670Q9BS34 389 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 G3BP2Q9UN86 482 aaKnown RBP13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 MAP4K5Q9Y4K4 846 aa13.93□□□□□ -0.18
CHMP1A-210ENST00000551981 SHANK1Q9Y566 2161 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 ARGFXA6NJG6 315 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 MYO1FO00160 1098 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 CDK14O94921 469 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 TIAF1O95411 115 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 DDAH2O95865 285 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 JCHAINP01591 159 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 MMP2P08253 660 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 SKILP12757 684 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 BRAFP15056 766 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms