RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 KLHL5Q96PQ7 755 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 PRR25Q96S07 402 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 ADAM2Q99965 735 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 KXD1Q9BQD3 176 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 ABHD14AQ9BUJ0 271 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 TEX101Q9BY14 249 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 CADM1Q9BY67 442 aaKnown RBP3.88□□□□□ -1.79
LIMA1-208ENST00000551691 CPVLQ9H3G5 476 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 PFDN4Q9NQP4 134 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 ARGLU1Q9NWB6 273 aaPredicted RBP3.88□□□□□ -1.79
LIMA1-208ENST00000551691 ZDHHC7Q9NXF8 308 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 ANAPC5Q9UJX4 755 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 CHST2Q9Y4C5 530 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 TNFRSF18Q9Y5U5 241 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 SLC4A4Q9Y6R1 1079 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 FAM169AQ9Y6X4 670 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 ACACAQ13085 2346 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 DENND4AQ7Z401 1863 aa3.88□□□□□ -1.79
LIMA1-208ENST00000551691 CREBBPQ92793 2442 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 MYH8P13535 1937 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 UNC119BA6NIH7 251 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 NPIPB13A6NJU9 1138 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 NPIPB5A8MRT5 1133 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 AGAP14A8MT82 685 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 NPIPB4C9JG80 1138 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 CTDSP2O14595 271 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 TACC1O75410 805 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ZFPL1O95159 310 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 TTLL1O95922 423 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 IL1AP01583 271 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ALDOCP09972 364 aaKnown RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 NR2F1P10589 423 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ZFXP17010 805 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ZNF8P17098 575 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ENGP17813 658 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 LAG3P18627 525 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 PRPH2P23942 346 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 OAS2P29728 719 aaKnown RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 MCM5P33992 734 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 PIK3CAP42336 1068 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 RPS9P46781 194 aaKnown RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 CXCL12P48061 93 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 VPS41P49754 854 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 CLCN4P51793 760 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 FOXL2P58012 376 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 YWHAZP63104 245 aaKnown RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 SIM1P81133 766 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 MRPS6P82932 125 aaKnown RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 B4GALNT1Q00973 533 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 GUCY1B3Q02153 619 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 SP4Q02446 784 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 CFHR1Q03591 330 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 COL10A1Q03692 680 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 DEUP1Q05D60 604 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 STXBP2Q15833 593 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 USH1GQ495M9 461 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ODF2Q5BJF6 829 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 RABL3Q5HYI8 236 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 GKAP1Q5VSY0 366 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 KIRREL2Q6UWL6 708 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 IL20RBQ6UXL0 311 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 CREBRFQ8IUR6 639 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ZNF444Q8N0Y2 327 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 SLC39A11Q8N1S5 342 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 CPXM2Q8N436 756 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 NKAIN3Q8N8D7 197 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 TMEM116Q8NCL8 245 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 MCUQ8NE86 351 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 RP9Q8TA86 221 aaKnown RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 GSDMBQ8TAX9 411 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 SMG7Q92540 1137 aaKnown RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 GTF3C6Q969F1 213 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ZNF707Q96C28 371 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ZNF558Q96NG5 402 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 EDEM2Q9BV94 578 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 HDHD5Q9BXW7 423 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 RNF26Q9BY78 433 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 SEMA4CQ9C0C4 833 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ZBP1Q9H171 429 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 OR10A4Q9H209 315 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 FBRSL1Q9HCM7 1045 aaKnown RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 PDE7BQ9NP56 450 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 KLC4Q9NSK0 619 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ATP8A2Q9NTI2 1148 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ABHD10Q9NUJ1 306 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 AURKAIP1Q9NWT8 199 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ARL15Q9NXU5 204 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 MKLN1Q9UL63 735 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 GINS2Q9Y248 185 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 FLNCQ14315 2725 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 PCSK5Q92824 1860 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 CLUHO75153 1309 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 GREB1Q4ZG55 1949 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 PLXNB3Q9ULL4 1909 aa3.87□□□□□ -1.79
LIMA1-208ENST00000551691 ASCC3Q8N3C0 2202 aaKnown RBP3.87□□□□□ -1.79
LIMA1-208ENST00000551691 LAMA4Q16363 1823 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 KIAA1217Q5T5P2 1943 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 LOXHD1Q8IVV2 1947 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 DOPEY2Q9Y3R5 2298 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 MYH4Q9Y623 1939 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms