RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 RASGEF1AQ8N9B8 481 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 TMEM145Q8NBT3 493 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 OR13H1Q8NG92 308 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 NELL1Q92832 810 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 SGF29Q96ES7 293 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 COX14Q96I36 57 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 TMEM109Q9BVC6 243 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 DUSP15Q9H1R2 295 aaPredicted RBP10.17□□□□□ -0.78
RAB5C-207ENST00000550504 P2RY12Q9H244 342 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 CCDC68Q9H2F9 335 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 VIPAS39Q9H9C1 493 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 PPCSQ9HAB8 311 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 ATXN10Q9UBB4 475 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 MOSPD1Q9UJG1 213 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 ZNF180Q9UJW8 692 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 SLC39A10Q9ULF5 831 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 VPS9D1Q9Y2B5 631 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 HS3ST3A1Q9Y663 406 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 CEP192Q8TEP8 1941 aa10.17□□□□□ -0.78
RAB5C-207ENST00000550504 THADAQ6YHU6 1953 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 IQANK1A0A1B0GTG1 560 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 HMX2A2RU54 273 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 TMEM202A6NGA9 273 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 IQCF5A8MTL0 148 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 AGPSO00116 658 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 RGS16O15492 202 aaPredicted RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 NIPSNAP2O75323 286 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 KRT37O76014 449 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 KRT38O76015 456 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 CDK14O94921 469 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 SNRPAP09012 282 aaKnown RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 THEGLP0DJG4 465 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 PKMP14618 531 aaKnown RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 ZNF8P17098 575 aaPredicted RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 KRT15P19012 456 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 RPS3P23396 243 aaKnown RBP eCLIP10.16□□□□□ -0.788e-7■■□□□ 11.4
RAB5C-207ENST00000550504 ITPKAP23677 461 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 NSG1P42857 185 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 THOP1P52888 689 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 CTSCP53634 463 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 KIAA1024LP59773 190 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 PFN3P60673 137 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 NHLH1Q02575 133 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 GTF2H3Q13889 308 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 PLK5Q496M5 336 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 WDR45BQ5MNZ6 344 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 TPRG1LQ5T0D9 272 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 LGSNQ5TDP6 509 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 HECTD2Q5U5R9 776 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 LYSMD4Q5XG99 296 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 PMS2CLQ68D20 193 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 CRTC3Q6UUV7 619 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 ENPP7Q6UWV6 458 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 KYAT3Q6YP21 454 aaKnown RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 PRR23BQ6ZRT6 265 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 C11orf74Q86VG3 221 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 TDRPQ86YL5 185 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 DCLK2Q8N568 766 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 BEND7Q8N7W2 519 aaPredicted RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 HEXDCQ8WVB3 486 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 SCG3Q8WXD2 468 aaKnown RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 BIRC8Q96P09 236 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 GPR22Q99680 433 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 MCMBPQ9BTE3 642 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 AARSD1Q9BTE6 412 aaKnown RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 ZCCHC2Q9C0B9 1178 aaKnown RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 KCNH6Q9H252 994 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 ACBD3Q9H3P7 528 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 TRIM39Q9HCM9 518 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 TM9SF3Q9HD45 589 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 SARS2Q9NP81 518 aaKnown RBP10.16□□□□□ -0.78
RAB5C-207ENST00000550504 EURLQ9NYK6 297 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 GNPTGQ9UJJ9 305 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 PRKAB1Q9Y478 270 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 PCDHB1Q9Y5F3 818 aa10.16□□□□□ -0.78
RAB5C-207ENST00000550504 GOLGA6L10A6NI86 522 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 E5RI56 91 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 SCAMP1O15126 338 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 SGTAO43765 313 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 VEGFDO43915 354 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 VPS26AO75436 327 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 RHOBTB1O94844 696 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 TRIM16O95361 564 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 ESR1P03372 595 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 WNT1P04628 370 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 OR56A5P0C7T3 313 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 MYZAPP0CAP1 466 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 CHRM3P20309 590 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 HTR1BP28222 390 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 CD38P28907 300 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 PBLDP30039 288 aaPredicted RBP10.15□□□□□ -0.78
RAB5C-207ENST00000550504 CNR2P34972 360 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 RABIFP47224 123 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 SLC12A2P55011 1212 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 CDKN2DP55273 166 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 YPEL5P62699 121 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 RACK1P63244 317 aaKnown RBP10.15□□□□□ -0.78
RAB5C-207ENST00000550504 SIM2Q14190 667 aaPredicted RBP10.15□□□□□ -0.78
RAB5C-207ENST00000550504 ZNF460Q14592 562 aa10.15□□□□□ -0.78
RAB5C-207ENST00000550504 USP10Q14694 798 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms