RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KRT10P13645 584 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 AOC1P19801 751 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 IGFBP6P24592 240 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 AOAHP28039 575 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 MAGEA4P43358 317 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 TPI1P60174 286 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 CYP27A1Q02318 531 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ASPHQ12797 758 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 SLC14A1Q13336 389 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF239Q16600 458 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 DPY19L1Q2PZI1 675 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 TTMPQ5BVD1 217 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 TRIM61Q5EBN2 209 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 MBLAC2Q68D91 279 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 MRPS31Q92665 395 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 SCLYQ96I15 445 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 SERINC2Q96SA4 455 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 SLC12A9Q9BXP2 914 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 DNAJC17Q9NVM6 304 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 NDOR1Q9UHB4 597 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 HCFC2Q9Y5Z7 792 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 A0A087WWV3 80 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 TRAV20A0A0B4J274 112 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 H0YIV9 168 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 RNF103O00237 685 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 METTL18O95568 372 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 DLDP09622 509 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ADH5P11766 374 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 PAMP19021 973 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 UBE2IP63279 158 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 LMAN2Q12907 356 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 CSTF3Q12996 717 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ELF2Q15723 593 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 FAM78AQ5JUQ0 283 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 CDCP2Q5VXM1 449 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 TMEM215Q68D42 235 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 FSTL4Q6MZW2 842 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 UGT3A1Q6NUS8 523 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 LCTLQ6UWM7 567 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 RNF44Q7L0R7 432 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ANKRD46Q86W74 232 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 FAM9CQ8IZT9 166 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 BBS5Q8N3I7 341 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 C17orf47Q8NEP4 570 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 CD200R1Q8TD46 325 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 INPP5DQ92835 1189 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 XPO6Q96QU8 1125 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF382Q96SR6 550 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 KCNK16Q96T55 309 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 TCHPQ9BT92 498 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 PITPNM3Q9BZ71 974 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 DRC3Q9H069 523 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 DDX47Q9H0S4 455 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF576Q9H609 170 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ECT2Q9H8V3 914 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ATP11BQ9Y2G3 1177 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ANKRD61A6NGH8 418 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 CST8O60676 142 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 ATP5HO75947 161 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 PRSS23O95084 383 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 CHRNB1P11230 501 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 TTPAP49638 278 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 ITGA8P53708 1063 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 SNRPD1P62314 119 aaKnown RBP4.84□□□□□ -1.64
SCAF11-212ENST00000549162 PPIAP62937 165 aaKnown RBP4.84□□□□□ -1.64
SCAF11-212ENST00000549162 TRADDQ15628 312 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 EOGTQ5NDL2 527 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 CFAP161Q6P656 301 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 TERB1Q8NA31 727 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 CERS2Q96G23 380 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 KLF6Q99612 283 aaPredicted RBP4.84□□□□□ -1.64
SCAF11-212ENST00000549162 TCF25Q9BQ70 676 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 BOCQ9BWV1 1114 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 TSSK1BQ9BXA7 367 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 CHST8Q9H2A9 424 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 SLC26A1Q9H2B4 701 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 GOLGA2P5Q9HBQ8 144 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 FANCFQ9NPI8 374 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 FAM86C1Q9NVL1 165 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 ZDHHC3Q9NYG2 299 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 KCNK4Q9NYG8 393 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 UBA2Q9UBT2 640 aaPredicted RBP4.84□□□□□ -1.64
SCAF11-212ENST00000549162 NEUROG3Q9Y4Z2 214 aa4.84□□□□□ -1.64
SCAF11-212ENST00000549162 C2CD2LO14523 706 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 TERTO14746 1132 aaKnown RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF217O75362 1048 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 IGSF6O95976 241 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 CALCAP01258 141 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PABPC1P11940 636 aaKnown RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 CEBPBP17676 345 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PSMC3P17980 439 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PBX2P40425 430 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 MATR3P43243 847 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 SOX8P57073 446 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 RPS14P62263 151 aaKnown RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 RPL6Q02878 288 aaKnown RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PDCD4Q53EL6 469 aaKnown RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 FNBP1LQ5T0N5 605 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 MICALCLQ6ZW33 695 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms