RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ITGA2BP08514 1039 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 PABPC1P11940 636 aaKnown RBP19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 HLA-DPA1P20036 260 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 MAGEA12P43365 314 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 POLD2P49005 469 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 SERPINH1P50454 418 aaKnown RBP19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 LIMK2P53671 638 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 ITIH4Q14624 930 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 INSCQ1MX18 579 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 C6orf132Q5T0Z8 1188 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 MPP7Q5T2T1 576 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 MROH9Q5TGP6 573 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 CCDC81Q6ZN84 652 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 NLRP9Q7RTR0 991 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 YTHDF3Q7Z739 585 aaKnown RBP19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 EXD3Q8N9H8 876 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 CCDC197Q8NCU1 140 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 OR52K2Q8NGK3 314 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 SRPK1Q96SB4 655 aaKnown RBP19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 KLF6Q99612 283 aaPredicted RBP19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 OMDQ99983 421 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 IQCGQ9H095 443 aaKnown RBP19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 C20orf96Q9NUD7 363 aaPredicted RBP19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 ANKMY1Q9P2S6 941 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 PLLPQ9Y342 182 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 BOD1L1Q8NFC6 3051 aa19.85■□□□□ 0.77
CTDSP2-204ENST00000548823 CXorf51AA0A1B0GTR3 108 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 MID1O15344 667 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 SNX3O60493 162 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 MAGEC1O60732 1142 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 CSO75390 466 aaKnown RBP19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 RNASEH2AO75792 299 aaKnown RBP19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 SGSHP51688 502 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 MAXP61244 160 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 ILF2Q12905 390 aaKnown RBP19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 BMPR2Q13873 1038 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 CST6Q15828 149 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 UGP2Q16851 508 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 XKR5Q6UX68 686 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 IQCHQ86VS3 1027 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 GABPB2Q8TAK5 448 aaPredicted RBP19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 LRRC8CQ8TDW0 803 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 TMA16Q96EY4 203 aaKnown RBP19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 CABS1Q96KC9 395 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 SEMA3CQ99985 751 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 PAIP2Q9BPZ3 127 aaKnown RBP19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 MTG2Q9H4K7 406 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 SLC17A7Q9P2U7 560 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 RIMKLBQ9ULI2 386 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 GRID1Q9ULK0 1009 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 PSAT1Q9Y617 370 aa19.84■□□□□ 0.77
CTDSP2-204ENST00000548823 SDC3O75056 442 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 LUC7L3O95232 432 aaKnown RBP19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 FGF1P05230 155 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 POLR2EP19388 210 aaKnown RBP19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 CR2P20023 1033 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 IHHQ14623 411 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 POU6F1Q14863 301 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 INO80DQ53TQ3 878 aaPredicted RBP19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 HSP90AA5PQ58FG0 334 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 KYAT3Q6YP21 454 aaKnown RBP19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 TRIM42Q8IWZ5 723 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 ANKS4BQ8N8V4 417 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 PLCD4Q9BRC7 762 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 CINPQ9BW66 212 aaPredicted RBP19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 FGFR1OP2Q9NVK5 253 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 DCDC2Q9UHG0 476 aa19.83■□□□□ 0.77
CTDSP2-204ENST00000548823 KLF11O14901 512 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 LATO43561 262 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 TBL1XO60907 577 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 GLRA3O75311 464 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 IL1BP01584 269 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 ALDOAP04075 364 aaKnown RBP19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 CKMT1AP12532 417 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 RBMS1P29558 406 aaKnown RBP19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 ARCN1P48444 511 aaKnown RBP19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 CDK18Q07002 472 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 OVGP1Q12889 678 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 RALGPS1Q5JS13 557 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 TSTD2Q5T7W7 516 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 RNF219Q5W0B1 726 aaPredicted RBP19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 STRA8Q7Z7C7 330 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 LMNTD2Q8IXW0 634 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 NDUFAF2Q8N183 169 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 SLC25A45Q8N413 288 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 OR4C6Q8NH72 309 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 RAB3IL1Q8TBN0 382 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 ZNF75CPQ92670 426 aaPredicted RBP19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 SLC46A1Q96NT5 459 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 FAM167BQ9BTA0 163 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 SPON2Q9BUD6 331 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 STARD5Q9NSY2 213 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 OR51B4Q9Y5P0 310 aa19.83■□□□□ 0.76
CTDSP2-204ENST00000548823 MROH6A6NGR9 719 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 MUSKO15146 869 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 BIRC5O15392 142 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 EDF1O60869 148 aaKnown RBP19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 ZMPSTE24O75844 475 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 GSTA1P08263 222 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms