RNA–Protein interactions for RNA: ENST00000547842.1

DDX23-205, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-205	ENST00000547842	PCDHGB7	Q9Y5F8	929 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	SCIN	Q9Y6U3	715 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	TEP1	Q99973	2627 aa	Known RBP	13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	CELSR2	Q9HCU4	2923 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	MED13	Q9UHV7	2174 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	PDZK1P1	A8MUH7	402 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	KMO	O15229	486 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	MTA2	O94776	668 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	FOLR1	P15328	257 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF7	P17097	686 aa	Predicted RBP	13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	IL4R	P24394	825 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	NIPAL4	Q0D2K0	466 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	CHAF1B	Q13112	559 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	QPCT	Q16769	361 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	INSC	Q1MX18	579 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	TDRD12	Q587J7	1177 aa	Known RBP	13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	CPZ	Q66K79	652 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	TXNRD3NB	Q6F5E7	133 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	IRGC	Q6NXR0	463 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	WASH2P	Q6VEQ5	465 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	ADGRG6	Q86SQ4	1221 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	SIDT2	Q8NBJ9	832 aa	Known RBP	13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	PRR7	Q8TB68	274 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	TEKT4	Q8WW24	435 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	UBXN4	Q92575	508 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	SLC41A2	Q96JW4	573 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	TSGA13	Q96PP4	275 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	RUFY1	Q96T51	708 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	WASH6P	Q9NQA3	447 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	FARSA	Q9Y285	508 aa	Known RBP	13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF451	Q9Y4E5	1061 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	HIVEP3	Q5T1R4	2406 aa		13.61	□□□□□ -0.23
DDX23-205	ENST00000547842	IGHV5-51	A0A0C4DH38	117 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	ARGFX	A6NJG6	315 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	BRAF	P15056	766 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	CDK11B	P21127	795 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	LPO	P22079	712 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	IDS	P22304	550 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	CCNC	P24863	283 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	RPL10	P27635	214 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	DCT	P40126	519 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	RPS18	P62269	152 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	PDE1B	Q01064	536 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	GALNT2	Q10471	571 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	MRPL49	Q13405	166 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	TUBB3	Q13509	450 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	LAMB3	Q13751	1172 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	GPR18	Q14330	331 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	PIGH	Q14442	188 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	CHRNA6	Q15825	494 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	SEPT7	Q16181	437 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	CCDC122	Q5T0U0	273 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	AGAP9	Q5VTM2	703 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	TIGD7	Q6NT04	549 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	CRTC3	Q6UUV7	619 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	LRRTM4	Q86VH4	590 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	HPS6	Q86YV9	775 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	FATE1	Q969F0	183 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF653	Q96CK0	615 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	EID2B	Q96D98	161 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	CXorf40B	Q96DE9	158 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	TIMM29	Q9BSF4	260 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	ZSCAN5A	Q9BUG6	496 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	SPATA16	Q9BXB7	569 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	SLC29A3	Q9BZD2	475 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	HAUS4	Q9H6D7	363 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	SLAMF7	Q9NQ25	335 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	DTL	Q9NZJ0	730 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	MYO1A	Q9UBC5	1043 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	DNAJC16	Q9Y2G8	782 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	TTLL3	Q9Y4R7	772 aa		13.6	□□□□□ -0.23
DDX23-205	ENST00000547842	CRYBG3	Q68DQ2	2970 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	OR52A4P	A6NMU1	304 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	DPM1	O60762	260 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	CEACAM4	O75871	244 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	CLDN1	O95832	211 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	MYBL1	P10243	752 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	ACY1	Q03154	408 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	MMRN1	Q13201	1228 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	KCNAB1	Q14722	419 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	PAFAH1B3	Q15102	231 aa	Known RBP	13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	IFI16	Q16666	785 aa	Known RBP	13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	PRR30	Q53SZ7	412 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF569	Q5MCW4	686 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	PDPK2P	Q6A1A2	396 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF547	Q8IVP9	402 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842		Q8NA96	180 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	GPR26	Q8NDV2	337 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	GLYATL1	Q969I3	302 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	TRIM11	Q96F44	468 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	ADGRE3	Q9BY15	652 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	ZFYVE1	Q9HBF4	777 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	FGF21	Q9NSA1	209 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	DOPEY1	Q5JWR5	2465 aa		13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.59	□□□□□ -0.23
DDX23-205	ENST00000547842	DDX3X	O00571	662 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
DDX23-205	ENST00000547842	VEGFD	O43915	354 aa		13.58	□□□□□ -0.24
DDX23-205	ENST00000547842	CDK14	O94921	469 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms