RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 ZNF7P17097 686 aaPredicted RBP12.98□□□□□ -0.33
CIT-214ENST00000544588 VCLP18206 1134 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 RPL10P27635 214 aaKnown RBP12.98□□□□□ -0.33
CIT-214ENST00000544588 ETV5P41161 510 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 FASLGP48023 281 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 TMPRSS3P57727 454 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 GSDMDP57764 484 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 GPLD1P80108 840 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 TMPRSS15P98073 1019 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 KIR2DS5Q14953 304 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 NR1D2Q14995 579 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 C16orf72Q14CZ0 275 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 CLPPQ16740 277 aaPredicted RBP12.98□□□□□ -0.33
CIT-214ENST00000544588 KHDC1Q4VXA5 237 aaKnown RBP12.98□□□□□ -0.33
CIT-214ENST00000544588 TMEM164Q5U3C3 297 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 TAB3Q8N5C8 712 aaPredicted RBP12.98□□□□□ -0.33
CIT-214ENST00000544588 FAM71DQ8N9W8 422 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 OR4D9Q8NGE8 314 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 BRSK1Q8TDC3 778 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 TSGA10Q9BZW7 698 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 SARS2Q9NP81 518 aaKnown RBP12.98□□□□□ -0.33
CIT-214ENST00000544588 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.98□□□□□ -0.33
CIT-214ENST00000544588 TMEM9Q9P0T7 183 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 CPNE7Q9UBL6 633 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 KLHL3Q9UH77 587 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 TMPRSS11EQ9UL52 423 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 ASXL3Q9C0F0 2248 aa12.98□□□□□ -0.33
CIT-214ENST00000544588 PRAMEF33A0A0G2JMD5 474 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 CHUKO15111 745 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 GPR39O43194 453 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 PRAMEF10O60809 474 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 CCL4P13236 92 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 MSH3P20585 1137 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 LPOP22079 712 aaPredicted RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 IDSP22304 550 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 PBLDP30039 288 aaPredicted RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 AKT1P31749 480 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 LIMK2P53671 638 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 DRG2P55039 364 aaKnown RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 UCNP55089 124 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 ITGA9Q13797 1035 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 TAF1AQ15573 450 aaPredicted RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 LDLRAP1Q5SW96 308 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 SEL1L2Q5TEA6 688 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 TMEM71Q6P5X7 295 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 TMEM220Q6QAJ8 160 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 DET1Q7L5Y6 550 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 CLEC14AQ86T13 490 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 FAM129CQ86XR2 697 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 RNF10Q8N5U6 811 aaKnown RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 AGBL5Q8NDL9 886 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 OR4K2Q8NGD2 314 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 ZNF398Q8TD17 642 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 PPP1R2P1Q96PQ5 205 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 VPS35Q96QK1 796 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 DPYSL5Q9BPU6 564 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 TBL1YQ9BQ87 522 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 TBC1D10AQ9BXI6 508 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 ZCCHC2Q9C0B9 1178 aaKnown RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 SCHIP1Q9P0W5 487 aaPredicted RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 KCTD3Q9Y597 815 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 PCDHB11Q9Y5F2 797 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 PCDHGA7Q9Y5G6 932 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 ADGRG1Q9Y653 693 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 CAPN6Q9Y6Q1 641 aa12.97□□□□□ -0.33
CIT-214ENST00000544588 SMG1Q96Q15 3661 aaKnown RBP12.97□□□□□ -0.33
CIT-214ENST00000544588 C5orf60A6NFR6 353 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 KRT86O43790 486 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 PPFIA2O75334 1257 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 POP7O75817 140 aaKnown RBP12.96□□□□□ -0.33
CIT-214ENST00000544588 ZNF189O75820 626 aaPredicted RBP12.96□□□□□ -0.33
CIT-214ENST00000544588 CRTAMO95727 393 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 AMD1P17707 334 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 CSF2RBP32927 897 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 CLCNKAP51800 687 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 CFHR1Q03591 330 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 CLN3Q13286 438 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 TRA2AQ13595 282 aaKnown RBP eCLIP12.96□□□□□ -0.33
CIT-214ENST00000544588 TGIF1Q15583 401 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 PARP6Q2NL67 630 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 SOWAHCQ53LP3 525 aaPredicted RBP12.96□□□□□ -0.33
CIT-214ENST00000544588 GPRC6AQ5T6X5 926 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 RANBP10Q6VN20 620 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 CCDC81Q6ZN84 652 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 ZFAND4Q86XD8 727 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 RASGEF1AQ8N9B8 481 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 AVL9Q8NBF6 648 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 JPH3Q8WXH2 748 aaPredicted RBP12.96□□□□□ -0.33
CIT-214ENST00000544588 CXorf40BQ96DE9 158 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 GORASP1Q9BQQ3 440 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 TIMM29Q9BSF4 260 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 ASB8Q9H765 288 aa12.96□□□□□ -0.33
CIT-214ENST00000544588 R3HDM2Q9Y2K5 976 aaKnown RBP12.96□□□□□ -0.33
CIT-214ENST00000544588 TP53BP1Q12888 1972 aaPredicted RBP12.96□□□□□ -0.34
CIT-214ENST00000544588 LAMA5O15230 3695 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 TCRBV7S2A1N4TA0A589 114 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 A6NCN8 305 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 OR2AG2A6NM03 316 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms