RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 EPHX1P07099 455 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 FAM153BP0C7A2 387 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ALOX12P18054 663 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SMU1Q2TAY7 513 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 FAM153CQ494X1 144 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SLC39A12Q504Y0 691 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TYW3Q6IPR3 259 aaKnown RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 C16orf46Q6P387 395 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 AHI1Q8N157 1196 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TMIEQ8NEW7 156 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 OR5K1Q8NHB7 308 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 MOAP1Q96BY2 351 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 PLEKHG4BQ96PX9 1271 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TUBA1CQ9BQE3 449 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SDCBP2Q9H190 292 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CCDC177Q9NQR7 707 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 FARSBQ9NSD9 589 aaKnown RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF624Q9P2J8 865 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF451Q9Y4E5 1061 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 FAM86B1E9PN63 330 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 MATN2O00339 956 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ARHGEF15O94989 841 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 PIGRP01833 764 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CA3P07451 260 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 FAM86B2P0C5J1 330 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 RHOQP17081 205 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CDH4P55283 916 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 YBEYP58557 167 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TDGQ13569 410 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 DSELQ8IZU8 1212 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 LSMEM2Q8N112 164 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ZBTB2Q8N680 514 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 RAB2BQ8WUD1 216 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ZBTB10Q96DT7 871 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ZHX1-C8orf76Q96EF9 292 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CENPNQ96H22 339 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 NEDD4LQ96PU5 975 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 DSN1Q9H410 356 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ARHGEF3Q9NR81 526 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CKLFQ9UBR5 152 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 PRKAG3Q9UGI9 489 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF221Q9UK13 617 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SLC12A4Q9UP95 1085 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 MRPS33Q9Y291 106 aaKnown RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 MEMO1Q9Y316 297 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 AP1M2Q9Y6Q5 423 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF780BQ9Y6R6 833 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 C1orf232A0A0U1RR37 186 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SYNDIG1LA6NDD5 238 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 FAM86C2PA6NEL3 165 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 NPC1O15118 1278 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SOX30O94993 753 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 HPRP00739 348 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 RBL1P28749 1068 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 PDX1P52945 283 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 MTTPP55157 894 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 FOXC1Q12948 553 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TAF13Q15543 124 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 MAPKAPK3Q16644 382 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CRY2Q49AN0 593 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 MPPE1Q53F39 396 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SNAP47Q5SQN1 464 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 MANEAQ5SRI9 462 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 IRF2BP2Q7Z5L9 587 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TSEN2Q8NCE0 465 aaKnown RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 OR14C36Q8NHC7 312 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 BPIFB1Q8TDL5 484 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CPNE2Q96FN4 548 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 KAZALD1Q96I82 304 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TBC1D10AQ9BXI6 508 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SLC4A5Q9BY07 1137 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 NOL11Q9H8H0 719 aaKnown RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 STOX2Q9P2F5 926 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF282Q9UDV7 671 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 NUDT5Q9UKK9 219 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 GPSM3Q9Y4H4 160 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 H3BQ06 376 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 RGS10O43665 173 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CHP2O43745 196 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CNTN5O94779 1100 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CD63P08962 238 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CCND3P30281 292 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 POLR2JP52435 117 aaKnown RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 E2F1Q01094 437 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TIFABQ6ZNK6 161 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CHSY3Q70JA7 882 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 STK32CQ86UX6 486 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CACUL1Q86Y37 369 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 ALDH16A1Q8IZ83 802 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 OFCC1Q8IZS5 231 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 C4orf32Q8N8J7 132 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 BRSK1Q8TDC3 778 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 AGAP11Q8TF27 550 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 NAT14Q8WUY8 206 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CAMK1GQ96NX5 476 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TFB2MQ9H5Q4 396 aaKnown RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CDH22Q9UJ99 828 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 STXBP5LQ9Y2K9 1186 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 PEAK1Q9H792 1746 aa7.75□□□□□ -1.17
VPS13D-211ENST00000543710 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms