RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545		A0A087WUV0	522 aa	Predicted RBP	10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	PRSS38	A1L453	326 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	OR2AG2	A6NM03	316 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	AGAP14	A8MT82	685 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545		H3BM21	787 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	ARHGAP33	O14559	1287 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	PRMT5	O14744	637 aa	Predicted RBP	10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	TNFRSF10C	O14798	259 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	RIPK2	O43353	540 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	GRID2	O43424	1007 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	NUAK1	O60285	661 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	TRIM16	O95361	564 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	S1PR4	O95977	384 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	IVL	P07476	585 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	OR56A5	P0C7T3	313 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	ITGB6	P18564	788 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	CTSK	P43235	329 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	CD151	P48509	253 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	ARRB1	P49407	418 aa	Predicted RBP	10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	SPEM2	Q0P670	501 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	GRIK2	Q13002	908 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	EIF2B5	Q13144	721 aa	Known RBP	10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	BRD3	Q15059	726 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	UAP1	Q16222	522 aa	Predicted RBP	10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	ALG11	Q2TAA5	492 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	HLA-B	Q31612	363 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	PLA2G4E	Q3MJ16	856 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	KBTBD12	Q3ZCT8	623 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	TCEAL6	Q6IPX3	200 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	CYS1	Q717R9	158 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	STRA8	Q7Z7C7	330 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	LRRTM4	Q86VH4	590 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	PHACTR4	Q8IZ21	702 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	CLDN19	Q8N6F1	224 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	AEN	Q8WTP8	325 aa	Known RBP	10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	TCEAL3	Q969E4	200 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	PDXP	Q96GD0	296 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	ZNF514	Q96K75	400 aa	Predicted RBP	10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	OR2M4	Q96R27	311 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	CYTH2	Q99418	400 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	CCDC77	Q9BR77	488 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	ZDHHC5	Q9C0B5	715 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	GAREM1	Q9H706	876 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	RMI1	Q9H9A7	625 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	CAPN10	Q9HC96	672 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	NSMCE4A	Q9NXX6	385 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	SUFU	Q9UMX1	484 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	IKBKG	Q9Y6K9	419 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	PRSS21	Q9Y6M0	314 aa		10.03	□□□□□ -0.8
CPSF7-221	ENST00000543545	TRPM6	Q9BX84	2022 aa		10.02	□□□□□ -0.8
CPSF7-221	ENST00000543545	GPR179	Q6PRD1	2367 aa		10.02	□□□□□ -0.8
CPSF7-221	ENST00000543545	FAM159B	A6NKW6	160 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	CXorf49	A8MYA2	514 aa	Predicted RBP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	GPR89A	B7ZAQ6	455 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	POC1B-GALNT4	F8VUJ3	575 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	KMO	O15229	486 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	CTIF	O43310	598 aa	Known RBP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	SDC3	O75056	442 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	POP7	O75817	140 aa	Known RBP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	HAUS5	O94927	633 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	AP2A2	O94973	939 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	CER1	O95813	267 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	AHSG	P02765	367 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	CSF2	P04141	144 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	ZNF806	P0C7X5	589 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	GPR89B	P0CG08	455 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	ACP5	P13686	325 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	VCL	P18206	1134 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	PBLD	P30039	288 aa	Predicted RBP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	MSH2	P43246	934 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	LEPR	P48357	1165 aa	Known RBP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	HK3	P52790	923 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	CTSC	P53634	463 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	HNRNPK	P61978	463 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	B4GALNT1	Q00973	533 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	BNC1	Q01954	994 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	NHLH1	Q02575	133 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	C1orf61	Q13536	156 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	SLC29A2	Q14542	456 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	SF3A2	Q15428	464 aa	Known RBP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	INSC	Q1MX18	579 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	TYSND1	Q2T9J0	566 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	KLHL38	Q2WGJ6	581 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	PYCR3	Q53H96	274 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	PRRT3	Q5FWE3	981 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	PLA2G2C	Q5R387	149 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	UBAP2	Q5T6F2	1119 aa	Known RBP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	ZNF449	Q6P9G9	518 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	CNST	Q6PJW8	725 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	KIAA0408	Q6ZU52	694 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	CHST15	Q7LFX5	561 aa	Predicted RBP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	SLC26A11	Q86WA9	606 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	LRRC6	Q86X45	466 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	CNTN4	Q8IWV2	1026 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	DCLK2	Q8N568	766 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	OXR1	Q8N573	874 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	BEND7	Q8N7W2	519 aa	Predicted RBP	10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	GPATCH11	Q8N954	259 aa		10.02	□□□□□ -0.81
CPSF7-221	ENST00000543545	LMX1A	Q8TE12	382 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms