RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 TGFBIQ15582 683 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 TRIP10Q15642 601 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 PITRM1Q5JRX3 1037 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 MPP7Q5T2T1 576 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 PLPP4Q5VZY2 271 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 OR2AP1Q8NGE2 309 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 LKAAEAR1Q8TD35 194 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 MYLIPQ8WY64 445 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 CDK15Q96Q40 435 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 ACOX2Q99424 681 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 ABCG8Q9H221 673 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 DHRS7Q9Y394 339 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 COMMD10Q9Y6G5 202 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 SCN8AQ9UQD0 1980 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 NPIPB15A6NHN6 443 aaPredicted RBP16.15■□□□□ 0.18
COL4A1-204ENST00000543140 NR5A2O00482 541 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 STX16O14662 325 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 NRP2O60462 931 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 SRCP12931 536 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 CHRNA6Q15825 494 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 LRRC73Q5JTD7 316 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 MICAL1Q8TDZ2 1067 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 SLC25A23Q9BV35 468 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 SLC4A7Q9Y6M7 1214 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 CHD7Q9P2D1 2997 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 KLK8O60259 260 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 GLUD1P00367 558 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 ZNF7P17097 686 aaPredicted RBP16.14■□□□□ 0.17
COL4A1-204ENST00000543140 CD9P21926 228 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 SERPINA4P29622 427 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 GJA8P48165 433 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 CDKN3Q16667 212 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 ASTLQ6HA08 431 aaPredicted RBP16.14■□□□□ 0.17
COL4A1-204ENST00000543140 CERS6Q6ZMG9 384 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 FRA10AC1Q70Z53 315 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 PHYKPLQ8IUZ5 450 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 OR52B6Q8NGF0 335 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 ZNF483Q8TF39 744 aaPredicted RBP16.14■□□□□ 0.17
COL4A1-204ENST00000543140 PCDHAC1Q9H158 963 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 IL1RL2Q9HB29 575 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 BATF3Q9NR55 127 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 MRGBPQ9NV56 204 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 CXXC1Q9P0U4 656 aaPredicted RBP16.14■□□□□ 0.17
COL4A1-204ENST00000543140 GLYATL1P3A0A0U1RQE8 302 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 CAPN8A6NHC0 703 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 NEDD8-MDP1E9PL57 170 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 E2F3O00716 465 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 KIAA0355O15063 1070 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 SLC25A14O95258 325 aaPredicted RBP16.14■□□□□ 0.17
COL4A1-204ENST00000543140 ITGALP20701 1170 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 KLC1Q07866 573 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 FUT11Q495W5 492 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 SNX20Q7Z614 316 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 SLCO3A1Q9UIG8 710 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 CRLS1Q9UJA2 301 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 PCDHB1Q9Y5F3 818 aa16.14■□□□□ 0.17
COL4A1-204ENST00000543140 SOCS5O75159 536 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 ESRRBO95718 433 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 GUCA1CO95843 209 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 LBPP18428 481 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 MAPK8P45983 427 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 DIO3P55073 304 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 RPL26P61254 145 aaKnown RBP16.13■□□□□ 0.17
COL4A1-204ENST00000543140 RPS6KA2Q15349 733 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 TEAD2Q15562 447 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 VPS26BQ4G0F5 336 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 SFT2D3Q587I9 215 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 TXNDC11Q6PKC3 985 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 CDYL2Q8N8U2 506 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 LRCH3Q96II8 777 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 ZDHHC6Q9H6R6 413 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 CARNS1A5YM72 827 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 GIPC1O14908 333 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 BAIAP3O94812 1187 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 OR4F21O95013 312 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 CSNK1DP48730 415 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 SNRPD1P62314 119 aaKnown RBP16.13■□□□□ 0.17
COL4A1-204ENST00000543140 MYLK3Q32MK0 819 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 RFLNAQ6ZTI6 216 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 RETREG3Q86VR2 466 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 SPATA24Q86W54 205 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 GPR65Q8IYL9 337 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 RBFAQ8N0V3 343 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 MIER2Q8N344 545 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 GPR26Q8NDV2 337 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 VOPP1Q96AW1 172 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 APPL1Q9UKG1 709 aa16.13■□□□□ 0.17
COL4A1-204ENST00000543140 HELZP42694 1942 aaKnown RBP16.12■□□□□ 0.17
COL4A1-204ENST00000543140 TRIM38O00635 465 aa16.12■□□□□ 0.17
COL4A1-204ENST00000543140 ACOT8O14734 319 aa16.12■□□□□ 0.17
COL4A1-204ENST00000543140 BCAS2O75934 225 aaPredicted RBP16.12■□□□□ 0.17
COL4A1-204ENST00000543140 MLYCDO95822 493 aa16.12■□□□□ 0.17
COL4A1-204ENST00000543140 CHRM1P11229 460 aaPredicted RBP16.12■□□□□ 0.17
COL4A1-204ENST00000543140 ACRV1P26436 265 aa16.12■□□□□ 0.17
COL4A1-204ENST00000543140 ACADVLP49748 655 aa16.12■□□□□ 0.17
COL4A1-204ENST00000543140 ATP4BP51164 291 aa16.12■□□□□ 0.17
COL4A1-204ENST00000543140 CRTC1Q6UUV9 634 aa16.12■□□□□ 0.17
COL4A1-204ENST00000543140 SBSNQ6UWP8 590 aa16.12■□□□□ 0.17
COL4A1-204ENST00000543140 GPRIN3Q6ZVF9 776 aa16.12■□□□□ 0.17
COL4A1-204ENST00000543140 OR56A4Q8NGH8 313 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms