RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 SEC61A1P61619 476 aaKnown RBP4.08□□□□□ -1.76
MDM2-229ENST00000543046 ELF3P78545 371 aaPredicted RBP4.08□□□□□ -1.76
MDM2-229ENST00000543046 ITGADQ13349 1161 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 PRPF4BQ13523 1007 aaKnown RBP4.08□□□□□ -1.76
MDM2-229ENST00000543046 PTCH1Q13635 1447 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 NPATQ14207 1427 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 CAMK4Q16566 473 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 PTGISQ16647 500 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 PRICKLE4Q2TBC4 344 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 ANKRD20A8PQ5CZ79 823 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 NADSYN1Q6IA69 706 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 MZT2BQ6NZ67 158 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 KLHL24Q6TFL4 600 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 CREB3L2Q70SY1 520 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 BRINP3Q76B58 766 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 SHFQ7M4L6 423 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 BHLHA9Q7RTU4 235 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 NLRP14Q86W24 1093 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 TMEM139Q8IV31 216 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 CCDC65Q8IXS2 484 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 ARFGAP2Q8N6H7 521 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 ZNF473Q8WTR7 871 aaKnown RBP4.08□□□□□ -1.76
MDM2-229ENST00000543046 TEKT4Q8WW24 435 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 ERGIC1Q969X5 290 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 OPTNQ96CV9 577 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 KLHL15Q96M94 604 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 GDAP1L1Q96MZ0 367 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 LRFN5Q96NI6 719 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 BBS4Q96RK4 519 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 SMC6Q96SB8 1091 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 CCT8L2Q96SF2 557 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 FIZ1Q96SL8 496 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 MAK16Q9BXY0 300 aaKnown RBP4.08□□□□□ -1.76
MDM2-229ENST00000543046 UPF3BQ9BZI7 483 aaKnown RBP4.08□□□□□ -1.76
MDM2-229ENST00000543046 API5Q9BZZ5 524 aaKnown RBP4.08□□□□□ -1.76
MDM2-229ENST00000543046 XPO4Q9C0E2 1151 aaKnown RBP4.08□□□□□ -1.76
MDM2-229ENST00000543046 YIPF3Q9GZM5 350 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 NACA2Q9H009 215 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 PLEKHA4Q9H4M7 779 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 RETREG1Q9H6L5 497 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 SMYD2Q9NRG4 433 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.08□□□□□ -1.76
MDM2-229ENST00000543046 OCIAD1Q9NX40 245 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 MPP6Q9NZW5 540 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 PAIP2BQ9ULR5 123 aaKnown RBP4.08□□□□□ -1.76
MDM2-229ENST00000543046 ARHGAP26Q9UNA1 814 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 CYP46A1Q9Y6A2 500 aa4.08□□□□□ -1.76
MDM2-229ENST00000543046 SHPRHQ149N8 1683 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 LMTK2Q8IWU2 1503 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 KDM6AO15550 1401 aaPredicted RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 KIAA0232Q92628 1395 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 ABCC4O15439 1325 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 A0A0U1RQJ8 604 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 CTAGE9A4FU28 777 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 BIRC5O15392 142 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 TIMM44O43615 452 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 ZBED4O75132 1171 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 FLOT1O75955 427 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 NDUFB4O95168 129 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 MBD4O95243 580 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 F9P00740 461 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 TGFB3P10600 412 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 FGF3P11487 239 aaPredicted RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 ITGAXP20702 1163 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 CHATP28329 748 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 GJB2P29033 226 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 KRT9P35527 623 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 MDH1P40925 334 aaKnown RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 CTCFP49711 727 aaPredicted RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 MPP1Q00013 466 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 SULT2A1Q06520 285 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 BTG3Q14201 252 aaPredicted RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 PPP2R5BQ15173 497 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 E2F5Q15329 346 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 HIST2H2ACQ16777 129 aaPredicted RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 ACCSLQ4AC99 568 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 SLC9B1Q4ZJI4 515 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 FAM69AQ5T7M9 428 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 ARMC3Q5W041 872 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 TXNDC8Q6A555 127 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 C1orf122Q6ZSJ8 110 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 C3orf62Q6ZUJ4 267 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 C11orf57Q6ZUT1 292 aaPredicted RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 NEK10Q6ZWH5 1172 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 CACNA2D4Q7Z3S7 1137 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 NOXA1Q86UR1 476 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 ERICH1Q86X53 443 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 VSTM4Q8IW00 320 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 LMNTD2Q8IXW0 634 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 STKLD1Q8NE28 680 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 TRPC4APQ8TEL6 797 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 CCDC12Q8WUD4 166 aaPredicted RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 MAIP1Q8WWC4 291 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 PANX2Q96RD6 677 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 EIF2AK1Q9BQI3 630 aaKnown RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 PAIP1Q9H074 479 aaKnown RBP4.07□□□□□ -1.76
MDM2-229ENST00000543046 MIS12Q9H081 205 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 SLCO5A1Q9H2Y9 848 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 VCXQ9H320 206 aa4.07□□□□□ -1.76
MDM2-229ENST00000543046 CENPHQ9H3R5 247 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms