RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 BMP8BP34820 402 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CD79BP40259 229 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 EIF1P41567 113 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ETV4P43268 484 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CPT1AP50416 773 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CLCNKBP51801 687 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TKTL1P51854 596 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 UGT2B15P54855 530 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ATP2C1P98194 919 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 EXOSC10Q01780 885 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CREMQ03060 361 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 GAD2Q05329 585 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF91Q05481 1191 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PPATQ06203 517 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CD300CQ08708 224 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 INCA1Q0VD86 236 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 FOXO1Q12778 655 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 BNIP3Q12983 259 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 STX5Q13190 355 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PMS2P3Q13401 168 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 NFYCQ13952 458 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PUM1Q14671 1186 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CBX2Q14781 532 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF169Q14929 603 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PDK1Q15118 436 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PON2Q15165 354 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SEC23AQ15436 765 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SLC18A3Q16572 532 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SGCAQ16586 387 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 C21orf62-AS1Q17RA5 79 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SPATS1Q496A3 300 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 DACT2Q5SW24 774 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ATAD3CQ5T2N8 411 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SEL1L2Q5TEA6 688 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PTRHD1Q6GMV3 140 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SLFN12LQ6IEE8 588 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TYW3Q6IPR3 259 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 DCUN1D2Q6PH85 259 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 DPP8Q6V1X1 898 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TFAP2EQ6VUC0 442 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ETV3LQ6ZN32 361 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PGAP1Q75T13 922 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 OTOAQ7RTW8 1153 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TMPRSS9Q7Z410 1059 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 AMIGO2Q86SJ2 522 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 HIPK1Q86Z02 1210 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 UNC5CLQ8IV45 518 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MAPKAPK5Q8IW41 473 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PPIL6Q8IXY8 311 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TIGD4Q8IY51 512 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CYP4Z2PQ8N1L4 340 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PYROXD2Q8N2H3 581 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CADM2Q8N3J6 435 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 FBXW8Q8N3Y1 598 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ARL14Q8N4G2 192 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 EIF4E3Q8N5X7 224 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TTLL6Q8N841 843 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 C2orf69Q8N8R5 385 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ANKRD42Q8N9B4 389 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 DTX3Q8N9I9 347 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM145Q8NBT3 493 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 LEMD2Q8NC56 503 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SLC37A3Q8NCC5 494 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CLRN3Q8NCR9 226 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MCUQ8NE86 351 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TRPV3Q8NET8 790 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ABHD11Q8NFV4 315 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 GOT1L1Q8NHS2 421 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 RHOXF1Q8NHV9 184 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MAGEE2Q8TD90 523 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 STON2Q8WXE9 905 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SNX19Q92543 992 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 GTF2H4Q92759 462 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 RPL3LQ92901 407 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 LPPQ93052 612 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 RFT1Q96AA3 541 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TCTN2Q96GX1 697 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 FEM1CQ96JP0 617 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ZFYVE19Q96K21 471 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 C9orf72Q96LT7 481 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 C10orf90Q96M02 699 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ZSWIM3Q96MP5 696 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CMTM3Q96MX0 182 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 QRFPRQ96P65 431 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 RBM15Q96T37 977 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CYTH2Q99418 400 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MEIS3Q99687 375 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SEC22CQ9BRL7 303 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TBCDQ9BTW9 1192 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 THTPAQ9BU02 230 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PDCD10Q9BUL8 212 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MND1Q9BWT6 205 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 IDI2Q9BXS1 227 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 GSDMCQ9BYG8 508 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ZYG11BQ9C0D3 744 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 RACGAP1Q9H0H5 632 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 IL25Q9H293 177 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 FOXP1Q9H334 677 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SYNDIG1Q9H7V2 258 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 COG4Q9H9E3 785 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms