RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 APOBEC4Q8WW27 367 aaKnown RBP23.63■■□□□ 1.37
LEMD3-203ENST00000541171 ELMO2Q96JJ3 720 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 UCK1Q9HA47 277 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 RPS6KL1Q9Y6S9 549 aa23.63■■□□□ 1.37
LEMD3-203ENST00000541171 GPR89AB7ZAQ6 455 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 RASSF9O75901 435 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 CDK14O94921 469 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 C9P02748 559 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 GPR89BP0CG08 455 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 BPIP17213 487 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 LEPRP48357 1165 aaKnown RBP23.62■■□□□ 1.37
LEMD3-203ENST00000541171 SH3BP2P78314 561 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 PDK1Q15118 436 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 SLC18A3Q16572 532 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 CCDC70Q6NSX1 233 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 RFX6Q8HWS3 928 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 ABHD17AQ96GS6 310 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 OR6C1Q96RD1 312 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 SLC25A51Q9H1U9 297 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 DEF6Q9H4E7 631 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 BPIFA1Q9NP55 256 aa23.62■■□□□ 1.37
LEMD3-203ENST00000541171 MT-CYBP00156 380 aaPredicted RBP23.61■■□□□ 1.37
LEMD3-203ENST00000541171 F8A1P23610 371 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 DRG2P55039 364 aaKnown RBP23.61■■□□□ 1.37
LEMD3-203ENST00000541171 DYNLT1P63172 113 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 IGFBP7Q16270 282 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 KHDC1Q4VXA5 237 aaKnown RBP23.61■■□□□ 1.37
LEMD3-203ENST00000541171 PDPK2PQ6A1A2 396 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 SLC9A4Q6AI14 798 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 C6orf15Q6UXA7 325 aaPredicted RBP23.61■■□□□ 1.37
LEMD3-203ENST00000541171 RASGRP3Q8IV61 690 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 GALNT6Q8NCL4 622 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 GDAP1Q8TB36 358 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 SLC35G2Q8TBE7 412 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 UBP1Q9NZI7 540 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 SPO11Q9Y5K1 396 aa23.61■■□□□ 1.37
LEMD3-203ENST00000541171 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.61■■□□□ 1.375e-7■■■■■ 30.9
LEMD3-203ENST00000541171 C3orf70A6NLC5 250 aaPredicted RBP23.6■■□□□ 1.37
LEMD3-203ENST00000541171 OR52A4PA6NMU1 304 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 AURKAO14965 403 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 PPP1R12AO14974 1030 aaPredicted RBP23.6■■□□□ 1.37
LEMD3-203ENST00000541171 KIF1CO43896 1103 aaKnown RBP23.6■■□□□ 1.37
LEMD3-203ENST00000541171 PMPCBO75439 489 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 KRT1P04264 644 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 TMEM253P0C7T8 217 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 TNNT1P13805 278 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 BRAFP15056 766 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 IDSP22304 550 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 DLSTP36957 453 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 CASRP41180 1078 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 MAP7Q14244 749 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 ZNF547Q8IVP9 402 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 RSC1A1Q92681 617 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 RNF25Q96BH1 459 aaPredicted RBP23.6■■□□□ 1.37
LEMD3-203ENST00000541171 CXorf40BQ96DE9 158 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 TIMM29Q9BSF4 260 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 GLOD4Q9HC38 313 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 NFKBIL1Q9UBC1 381 aaPredicted RBP23.6■■□□□ 1.37
LEMD3-203ENST00000541171 ANAPC2Q9UJX6 822 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 CROTQ9UKG9 612 aa23.6■■□□□ 1.37
LEMD3-203ENST00000541171 NAV2Q8IVL1 2488 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 VEGFDO43915 354 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 KATNA1O75449 491 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 KIAA0754O94854 1291 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 HNRNPH3P31942 346 aaKnown RBP23.59■■□□□ 1.37
LEMD3-203ENST00000541171 SEPT6Q14141 434 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 ODF2Q5BJF6 829 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 CACHD1Q5VU97 1274 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 FAM92BQ6ZTR7 304 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 ZNF768Q9H5H4 540 aaKnown RBP23.59■■□□□ 1.37
LEMD3-203ENST00000541171 POT1Q9NUX5 634 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 TMPRSS11EQ9UL52 423 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 PCDHB3Q9Y5E6 796 aa23.59■■□□□ 1.37
LEMD3-203ENST00000541171 ZNF487B1APH4 448 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 AKR1B10O60218 316 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 NDUFA10O95299 355 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 NDST3O95803 873 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 ZFXP17010 805 aaPredicted RBP23.58■■□□□ 1.37
LEMD3-203ENST00000541171 PTMSP20962 102 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 GTF2H3Q13889 308 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 ERV3-1Q14264 604 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 GPR18Q14330 331 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 IRGCQ6NXR0 463 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 ABRAXAS1Q6UWZ7 409 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 TRAPPC5Q8IUR0 188 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 TADA1Q96BN2 335 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 STAMBPL1Q96FJ0 436 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 OLFM3Q96PB7 478 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 XPO4Q9C0E2 1151 aaKnown RBP23.58■■□□□ 1.37
LEMD3-203ENST00000541171 SLC40A1Q9NP59 571 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 PTPN13Q12923 2485 aa23.58■■□□□ 1.37
LEMD3-203ENST00000541171 A0A0A6YYK5 440 aaPredicted RBP23.57■■□□□ 1.36
LEMD3-203ENST00000541171 TOX3O15405 576 aaPredicted RBP23.57■■□□□ 1.36
LEMD3-203ENST00000541171 TMEM115Q12893 351 aaPredicted RBP23.57■■□□□ 1.36
LEMD3-203ENST00000541171 ASTE1Q2TB18 679 aaPredicted RBP23.57■■□□□ 1.36
LEMD3-203ENST00000541171 ATP13A5Q4VNC0 1218 aa23.57■■□□□ 1.36
LEMD3-203ENST00000541171 LACTB2Q53H82 288 aaPredicted RBP23.57■■□□□ 1.36
LEMD3-203ENST00000541171 TEX44Q53QW1 395 aa23.57■■□□□ 1.36
LEMD3-203ENST00000541171 OR8K1Q8NGG5 319 aa23.57■■□□□ 1.36
LEMD3-203ENST00000541171 TTC25Q96NG3 672 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms