RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TKTL2Q9H0I9 626 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 SLAMF7Q9NQ25 335 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 TRNAU1APQ9NX07 287 aaKnown RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ERVK13-1Q9NX77 482 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ARHGEF38Q9NXL2 777 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 RRN3Q9NYV6 651 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 TMEM9Q9P0T7 183 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 TAAR2Q9P1P5 351 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ZNF212Q9UDV6 495 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 PFDN2Q9UHV9 154 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CROTQ9UKG9 612 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ZNF281Q9Y2X9 895 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 COQ6Q9Y2Z9 468 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 MFHAS1Q9Y4C4 1052 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 PCDHGA6Q9Y5G7 932 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 DCHS2Q6V1P9 2916 aa4.59□□□□□ -1.68
SNHG1-214ENST00000540865 ZNF469Q96JG9 3925 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 A0A1B0GTL3 188 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 TSPAN11A1L157 253 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PRSS38A1L453 326 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PIPSLA2A3N6 862 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 A6NCN8 305 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 C21orf140B9A014 251 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 I6L893 689 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PPM1DO15297 605 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PMM2O15305 246 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PDPK1O15530 556 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 MED7O43513 233 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 KATNA1O75449 491 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 DNAJB5O75953 348 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 F9P00740 461 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 CALCAP01258 141 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 NAT2P11245 290 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 SYT1P21579 422 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 XPAP23025 273 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 NFKBIAP25963 317 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ITGA3P26006 1051 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ZNF143P52747 638 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PER3P56645 1201 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 POU4F1Q01851 419 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PDCLQ13371 301 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 KIR3DS1Q14943 382 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 CHRNA6Q15825 494 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ZNF124Q15973 351 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 DCAF17Q5H9S7 520 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 LRRC73Q5JTD7 316 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 TCERG1LQ5VWI1 586 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 RESP18Q5W5W9 173 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ANKRD40Q6AI12 368 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 GTF2IRD2BQ6EKJ0 949 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ERAP2Q6P179 960 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 SPNS3Q6ZMD2 512 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 TMEM135Q86UB9 458 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 GTF2IRD2Q86UP8 949 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 SLC47A2Q86VL8 602 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 TRIM59Q8IWR1 403 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PPM1KQ8N3J5 372 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PLA2G15Q8NCC3 412 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 TMEM52Q8NDY8 209 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 OR10G6Q8NH81 332 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 CASKIN2Q8WXE0 1202 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 CCDC47Q96A33 483 aaKnown RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PNPLA2Q96AD5 504 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PGAP3Q96FM1 320 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 HMCESQ96FZ2 354 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 AHCYL2Q96HN2 611 aaKnown RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 LURAP1Q96LR2 239 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 GDAP1L1Q96MZ0 367 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ZNF396Q96N95 335 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 NT5C1BQ96P26 610 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ULBP3Q9BZM4 244 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ZYG11BQ9C0D3 744 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 RETREG1Q9H6L5 497 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 WDCPQ9H6R7 721 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 WDR26Q9H7D7 661 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 METTL14Q9HCE5 456 aaKnown RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 APMAPQ9HDC9 416 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PCDH12Q9NPG4 1184 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ANLNQ9NQW6 1124 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PIGVQ9NUD9 493 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 MPP6Q9NZW5 540 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 RCOR3Q9P2K3 495 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 PPARGC1AQ9UBK2 798 aaKnown RBP4.58□□□□□ -1.68
SNHG1-214ENST00000540865 CNTN6Q9UQ52 1028 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 MTMR6Q9Y217 621 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 SNX10Q9Y5X0 201 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 ACTL7AQ9Y615 435 aa4.58□□□□□ -1.68
SNHG1-214ENST00000540865 GOLGA6L3A6NEY3 463 aa4.57□□□□□ -1.68
SNHG1-214ENST00000540865 ANKUB1A6NFN9 424 aa4.57□□□□□ -1.68
SNHG1-214ENST00000540865 ZSCAN5CA6NGD5 496 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-214ENST00000540865 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
SNHG1-214ENST00000540865 A8MU76 341 aa4.57□□□□□ -1.68
SNHG1-214ENST00000540865 AURKAO14965 403 aa4.57□□□□□ -1.68
SNHG1-214ENST00000540865 SLC16A3O15427 465 aaKnown RBP4.57□□□□□ -1.68
SNHG1-214ENST00000540865 SRGAP2O75044 1071 aa4.57□□□□□ -1.68
SNHG1-214ENST00000540865 DAB1O75553 588 aa4.57□□□□□ -1.68
SNHG1-214ENST00000540865 CEACAM4O75871 244 aa4.57□□□□□ -1.68
SNHG1-214ENST00000540865 RECQL5O94762 991 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-214ENST00000540865 IGSF6O95976 241 aa4.57□□□□□ -1.68
SNHG1-214ENST00000540865 MT-ND3P03897 115 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms