RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SLC22A1O15245 554 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 C2P06681 752 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TAF6P49848 677 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 BNIP2Q12982 314 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 ADAM15Q13444 863 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 DUSP6Q16828 381 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 GOLGA7BQ2TAP0 167 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 NHSL2Q5HYW2 709 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 MAVSQ7Z434 540 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 MPP5Q8N3R9 675 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 WDTC1Q8N5D0 677 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 NIPA2Q8N8Q9 360 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 CMASQ8NFW8 434 aaPredicted RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 ING5Q8WYH8 240 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 ELMO1Q92556 727 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 CLP1Q92989 425 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 EXT2Q93063 718 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 B3GALT6Q96L58 329 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 NODALQ96S42 347 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 NUAK2Q9H093 628 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 CAB39LQ9H9S4 337 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TOR4AQ9NXH8 423 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 HCSTQ9UBK5 93 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 NDRG2Q9UN36 371 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 FOCADQ5VW36 1801 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TMCC2O75069 709 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 ALDOAP04075 364 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 BMP2P12643 396 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 ELK4P28324 431 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 GRIA1P42261 906 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 NSUN2Q08J23 767 aaKnown RBP eCLIP8.62□□□□□ -1.03
DDB1-217ENST00000540166 TOP3AQ13472 1001 aaPredicted RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 NFYCQ13952 458 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 SV2CQ496J9 727 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 FAM209AQ5JX71 171 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 CLLU1OSQ5K130 101 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 LINC00523Q86TU6 105 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 ACOT1Q86TX2 421 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TBC1D21Q8IYX1 336 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 ANKRD52Q8NB46 1076 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 ZFP90Q8TF47 636 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 CERS2Q96G23 380 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 MAELQ96JY0 434 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 WDR83Q9BRX9 315 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 SNRNP25Q9BV90 132 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 FUNDC2Q9BWH2 189 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TRIT1Q9H3H1 467 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 LRRC40Q9H9A6 602 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 SFMBT1Q9UHJ3 866 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TNFSF13BQ9Y275 285 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 ACOT9Q9Y305 439 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 BCAS1O75363 584 aaPredicted RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 ASGR2P07307 311 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 CNPP09543 421 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 DBTP11182 482 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 RPL9P32969 192 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 BRCC3P46736 316 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 NDST1P52848 882 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 OR2B6P58173 313 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TARBP2Q15633 366 aaKnown RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 C6orf10Q5SRN2 563 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 EEF1DP3Q658K8 133 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 SH2D5Q6ZV89 423 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 FKBP9P1Q75LS8 142 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 P2RY8Q86VZ1 359 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 SVOPQ8N4V2 548 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 AMER2Q8N7J2 671 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 KCNN1Q92952 543 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 RNF34Q969K3 372 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 NSMCE2Q96MF7 247 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 KLHL5Q96PQ7 755 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 BBS2Q9BXC9 721 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 LHPPQ9H008 270 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 RNF39Q9H2S5 420 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TMEM134Q9H6X4 195 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 ZFP14Q9HCL3 533 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 CA14Q9ULX7 337 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 NDUFAF1Q9Y375 327 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TESMINQ9Y4I5 508 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 MUC6Q6W4X9 2439 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 KRT87PA6NCN2 255 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 RGS5O15539 181 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 SEMA3DO95025 777 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 CKMP06732 381 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ATF4P18848 351 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 GLDCP23378 1020 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 PCSK1P29120 753 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 INTS11Q5TA45 600 aaKnown RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 CES4AQ5XG92 561 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 AGMOQ6ZNB7 445 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 FAM183BPQ6ZVS7 135 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 GRASPQ7Z6J2 395 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 ADGRD2Q7Z7M1 963 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 PSD2Q9BQI7 771 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 SDCBP2Q9H190 292 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 VRTNQ9H8Y1 702 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 NANOGQ9H9S0 305 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 DPP3Q9NY33 737 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 COMMD10Q9Y6G5 202 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 AQP12BA6NM10 295 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms