RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 STK32CQ86UX6 486 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 ZC3HC1Q86WB0 502 aaKnown RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 GRAMD2AQ8IUY3 354 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 TP53INP2Q8IXH6 220 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 ZNF567Q8N184 647 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 CLEC4FQ8N1N0 589 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 PAPD5Q8NDF8 572 aaKnown RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 RPL3LQ92901 407 aaKnown RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 KHSRPQ92945 711 aaKnown RBP eCLIP11.82□□□□□ -0.52
NEK6-212ENST00000539416 RNF145Q96MT1 663 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 CLPBQ9H078 707 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 PIF1Q9H611 641 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 PLEKHA5Q9HAU0 1116 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 SMURF2Q9HAU4 748 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 LRRC4Q9HBW1 653 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 QPCTLQ9NXS2 382 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 ZNF221Q9UK13 617 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 VANGL2Q9ULK5 521 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 ISPDA4D126 451 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 MDM4O15151 490 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 MFSD11O43934 449 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 DAB1O75553 588 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 GOT1P17174 413 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 MAP2K4P45985 399 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 ALDH3A2P51648 485 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 PLK1P53350 603 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 TPD52P55327 224 aaPredicted RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 MRPS15P82914 257 aaKnown RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 DAG1Q14118 895 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 FRG1Q14331 258 aaKnown RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 CDK10Q15131 360 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 SURF1Q15526 300 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 TMEM132AQ24JP5 1023 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 DCAF4L1Q3SXM0 396 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 TXNDC11Q6PKC3 985 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 GDPD3Q7L5L3 318 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 CUZD1Q86UP6 607 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 MFSD6LQ8IWD5 586 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 ELMOD2Q8IZ81 293 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 MINDY1Q8N5J2 469 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 LEMD2Q8NC56 503 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 IL17RDQ8NFM7 739 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 DNAJB14Q8TBM8 379 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 TMBIM1Q969X1 311 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 DMRTB1Q96MA1 342 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 HOPXQ9BPY8 73 aaPredicted RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 TRIM39Q9HCM9 518 aa11.82□□□□□ -0.52
NEK6-212ENST00000539416 CAB39Q9Y376 341 aaPredicted RBP11.82□□□□□ -0.52
NEK6-212ENST00000539416 MAGEB16A2A368 324 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 TBKBP1A7MCY6 615 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 XPNPEP2O43895 674 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 PCNAP12004 261 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 CES1P23141 567 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 ARNTP27540 789 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 NR2C2P49116 596 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 ZNF135P52742 658 aaPredicted RBP11.81□□□□□ -0.52
NEK6-212ENST00000539416 KIF19Q2TAC6 998 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 NEK5Q6P3R8 708 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 LARP4Q71RC2 724 aaKnown RBP eCLIP11.81□□□□□ -0.52
NEK6-212ENST00000539416 PIWIL4Q7Z3Z4 852 aaKnown RBP11.81□□□□□ -0.52
NEK6-212ENST00000539416 DNAAF3Q8N9W5 541 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 TMEM40Q8WWA1 233 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 BIRC7Q96CA5 298 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 LRRC58Q96CX6 371 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 HEXIM2Q96MH2 286 aaKnown RBP11.81□□□□□ -0.52
NEK6-212ENST00000539416 ZNF300Q96RE9 604 aaPredicted RBP11.81□□□□□ -0.52
NEK6-212ENST00000539416 SNX18Q96RF0 628 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 AMBRA1Q9C0C7 1298 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 TRMT13Q9NUP7 481 aaKnown RBP11.81□□□□□ -0.52
NEK6-212ENST00000539416 FAM118AQ9NWS6 357 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 EVLQ9UI08 416 aaPredicted RBP11.81□□□□□ -0.52
NEK6-212ENST00000539416 ACOT9Q9Y305 439 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 PCDHA9Q9Y5H5 950 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 AP3D1O14617 1153 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 HUS1O60921 280 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 SOAT2O75908 522 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 LRIG2O94898 1065 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 NMBRP28336 390 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 SDC4P31431 198 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 CYP2C18P33260 490 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
NEK6-212ENST00000539416 OSTNP61366 133 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 DPYSL2Q16555 572 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 FUT11Q495W5 492 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 AGAP6Q5VW22 663 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 HS3ST5Q8IZT8 346 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 NLGN4XQ8N0W4 816 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 METTL4Q8N3J2 472 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 TMEM125Q96AQ2 219 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 AGAP4Q96P64 663 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 MBOAT4Q96T53 435 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 TBCBQ99426 244 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 NECTIN3Q9NQS3 549 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 PTGDR2Q9Y5Y4 395 aa11.81□□□□□ -0.52
NEK6-212ENST00000539416 KCNK1O00180 336 aa11.8□□□□□ -0.52
NEK6-212ENST00000539416 SLC1A7O00341 560 aa11.8□□□□□ -0.52
NEK6-212ENST00000539416 NOBOXO60393 691 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms