RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 LAYNQ6UX15 382 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 GPRIN3Q6ZVF9 776 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 CAMK1DQ8IU85 385 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 CMTR2Q8IYT2 770 aaKnown RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 APCDD1Q8J025 514 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 GID8Q9NWU2 228 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 FNDC3AQ9Y2H6 1198 aaKnown RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 TIMM22Q9Y584 194 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 CXorf51AA0A1B0GTR3 108 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 SCAMP3O14828 347 aaKnown RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 GIPC1O14908 333 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 DNAJA2O60884 412 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 TRBC1P01850 177 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 CYBBP04839 570 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 ALPIP09923 528 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 PRDX3P30048 256 aaKnown RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 SLC7A1P30825 629 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 CLCN2P51788 898 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 ECT2LQ008S8 904 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 BCL2L1Q07817 233 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 PCBP2Q15366 365 aaKnown RBP eCLIP17.73■□□□□ 0.43
GNE-204ENST00000539208 VPS26BQ4G0F5 336 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 FBXL19Q6PCT2 694 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 AUTS2Q8WXX7 1259 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 ATP6V1E2Q96A05 226 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 ZUFSPQ96AP4 578 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 UHRF1Q96T88 793 aaPredicted RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 BRINP2Q9C0B6 783 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 RNF208Q9H0X6 261 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 ZFYVE1Q9HBF4 777 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 AIG1Q9NVV5 245 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 APPL1Q9UKG1 709 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 TNPO3Q9Y5L0 923 aaKnown RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 H0YJX3 145 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 GAPDHSO14556 408 aaPredicted RBP17.72■□□□□ 0.43
GNE-204ENST00000539208 SMAD6O43541 496 aaKnown RBP17.72■□□□□ 0.43
GNE-204ENST00000539208 LILRB3O75022 631 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 CCL5P13501 91 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 VEGFBP49765 207 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 SLC7A9P82251 487 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 CREMQ03060 361 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 RBBP7Q16576 425 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 CDKN3Q16667 212 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 FBXO48Q5FWF7 155 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 LYPLAL1Q5VWZ2 237 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 UGT2A3Q6UWM9 527 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 SNX20Q7Z614 316 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 ADAMTSL2Q86TH1 951 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 CHCHD4Q8N4Q1 142 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 DDI1Q8WTU0 396 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 PBXIP1Q96AQ6 731 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 PLEKHG4BQ96PX9 1271 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 CLPBQ9H078 707 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 SAGE1Q9NXZ1 904 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 ST14Q9Y5Y6 855 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 LTBP2Q14767 1821 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 TRBV5-4A0A0C4DH59 114 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 TEX28O15482 410 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 STAMBPO95630 424 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 MYCP01106 439 aaPredicted RBP17.72■□□□□ 0.43
GNE-204ENST00000539208 HSD17B1P14061 328 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 MNX1P50219 401 aaPredicted RBP17.72■□□□□ 0.43
GNE-204ENST00000539208 CHN2P52757 468 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 NME5P56597 212 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 TLR1Q15399 786 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 MAP7D1Q3KQU3 841 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 MPPE1Q53F39 396 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 RNF220Q5VTB9 566 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 SERPINA9Q86WD7 417 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 DHFR2Q86XF0 187 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 ST13P4Q8IZP2 240 aaPredicted RBP17.72■□□□□ 0.43
GNE-204ENST00000539208 RBFAQ8N0V3 343 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 PHC3Q8NDX5 983 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 TM6SF2Q9BZW4 377 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 SARS2Q9NP81 518 aaKnown RBP17.72■□□□□ 0.43
GNE-204ENST00000539208 RIC8BQ9NVN3 520 aa17.72■□□□□ 0.43
GNE-204ENST00000539208 KIAA1522Q9P206 1035 aaPredicted RBP17.72■□□□□ 0.43
GNE-204ENST00000539208 EVLQ9UI08 416 aaPredicted RBP17.72■□□□□ 0.43
GNE-204ENST00000539208 EIF2B4Q9UI10 523 aaKnown RBP17.72■□□□□ 0.43
GNE-204ENST00000539208 A0A1W2PP18 115 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 IQCF5A8MTL0 148 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 FXYD1O00168 92 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 PRAMEF1O95521 474 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 APLP1P51693 650 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 DIO3P55073 304 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 ERVK-8P63133 956 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 PTRHD1Q6GMV3 140 aaKnown RBP17.71■□□□□ 0.43
GNE-204ENST00000539208 FIBINQ8TAL6 211 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 MRPS31Q92665 395 aaKnown RBP17.71■□□□□ 0.43
GNE-204ENST00000539208 SLCO4A1Q96BD0 722 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 SLC39A3Q9BRY0 314 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 ABCB8Q9NUT2 735 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 GNPTGQ9UJJ9 305 aa17.71■□□□□ 0.43
GNE-204ENST00000539208 NME4O00746 187 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 GPR39O43194 453 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 GABRR2P28476 465 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 NFATC2Q13469 925 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 RCAN2Q14206 197 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 PDCD4Q53EL6 469 aaKnown RBP17.7■□□□□ 0.42
GNE-204ENST00000539208 SBSNQ6UWP8 590 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms