RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 DIRAS2Q96HU8 199 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CLPBQ9H078 707 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SDCBP2Q9H190 292 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 COQ3Q9NZJ6 369 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ENOPH1Q9UHY7 261 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ERVW-1Q9UQF0 538 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 PTPRJQ12913 1337 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 BTN3A1O00481 513 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ZW10O43264 779 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MZF1P28698 734 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 GMPSP49915 693 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CTBP1Q13363 440 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 PMS2P3Q13401 168 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SYTL3Q4VX76 610 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CLEC6AQ6EIG7 209 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 PNCKQ6P2M8 343 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ERICH5Q6P6B1 374 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 FAM183BPQ6ZVS7 135 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MILR1Q7Z6M3 343 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 KIAA1958Q8N8K9 716 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF670Q9BS34 389 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SNRNP25Q9BV90 132 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 LIN7BQ9HAP6 207 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 RCOR3Q9P2K3 495 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 OGTO15294 1046 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TOP3BO95985 862 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CXCL8P10145 99 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TXNP10599 105 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 NFKB1P19838 968 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 IGFBP5P24593 272 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 GSTM5P46439 218 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 GNPDA1P46926 289 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 RARRES1P49788 294 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ALDH3A2P51648 485 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CDH13P55290 713 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TDRD10Q5VZ19 366 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 USP51Q70EK9 711 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TXNRD3Q86VQ6 643 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM132CQ8N3T6 1108 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CDK5RAP1Q96SZ6 601 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 GAD1Q99259 594 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 LHX5Q9H2C1 402 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MAP3K20Q9NYL2 800 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CFL2Q9Y281 166 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MFHAS1Q9Y4C4 1052 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 PPP2R3BQ9Y5P8 575 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SCN7AQ01118 1682 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ICMTO60725 284 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 PSIP1O75475 530 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 UBL4AP11441 157 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CDK10Q15131 360 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TIGD3Q6B0B8 471 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 FAM20CQ8IXL6 584 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ANKRD53Q8N9V6 530 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 GTF3C2Q8WUA4 911 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 HDAC10Q969S8 669 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 RBM4BQ9BQ04 359 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 RBM4Q9BWF3 364 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CRISPLD1Q9H336 500 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF358Q9NW07 568 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 OXSMQ9NWU1 459 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MOCS1Q9NZB8 636 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 VAV3Q9UKW4 847 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 OAZ3Q9UMX2 235 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MRPS7Q9Y2R9 242 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CRYL1Q9Y2S2 319 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SLX4Q8IY92 1834 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ARPC4-TTLL3A0A0A6YYG9 625 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 GLTPD2A6NH11 291 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 C9IYK1 514 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SORBS2O94875 1100 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 AP2A2O94973 939 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 WDPCPO95876 746 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ITGA2P17301 1181 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 TFEBP19484 476 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 F8A1P23610 371 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MAPK12P53778 367 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 NRLP54845 237 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 EEFSECP57772 596 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 IRF9Q00978 393 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 NFE2L1Q14494 772 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PCLAFQ15004 111 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PIK3R6Q5UE93 754 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 LCN1P1Q5VSP4 162 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 THEM5Q8N1Q8 247 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CMASQ8NFW8 434 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CANT1Q8WVQ1 401 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 UQCC2Q9BRT2 126 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 RACGAP1Q9H0H5 632 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 WDCPQ9H6R7 721 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 BCAS3Q9H6U6 928 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 AGO4Q9HCK5 861 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PDP1Q9P0J1 537 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PFDN2Q9UHV9 154 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 KIAA1257Q9ULG3 409 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CLDN24A6NM45 220 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CXorf49A8MYA2 514 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 FAM220BPB1ANY3 271 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SHOXO15266 292 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 NDST3O95803 873 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms