RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 CTBSQ01459 385 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 TRIM32Q13049 653 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 KCNA10Q16322 511 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 XKR7Q5GH72 579 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 NANOGP8Q6NSW7 305 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 PSAPL1Q6NUJ1 521 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 PTRH1Q86Y79 214 aaKnown RBP12.97□□□□□ -0.33
LGR5-202ENST00000536515 TMEM199Q8N511 208 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 CDYL2Q8N8U2 506 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 MAGEE2Q8TD90 523 aaPredicted RBP12.97□□□□□ -0.33
LGR5-202ENST00000536515 SEPT8Q92599 483 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 BIRC8Q96P09 236 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 CDK15Q96Q40 435 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 MGME1Q9BQP7 344 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 NANOGQ9H9S0 305 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 EIF2B4Q9UI10 523 aaKnown RBP12.97□□□□□ -0.33
LGR5-202ENST00000536515 CDC14AQ9UNH5 594 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 FADS3Q9Y5Q0 445 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 ANKRD36A6QL64 1941 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 GREB1Q4ZG55 1949 aa12.97□□□□□ -0.33
LGR5-202ENST00000536515 A0A0U1RQS6 177 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 GIPC1O14908 333 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 TLR5O60602 858 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 OR4F21O95013 312 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 FCGR1AP12314 374 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 SLC6A4P31645 630 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 MAGEA11P43364 429 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 GNA12Q03113 381 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 PTPRRQ15256 657 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 ZBED5Q49AG3 693 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 BBS5Q8N3I7 341 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 FNDC5Q8NAU1 212 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 TSPEARQ8WU66 669 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 EEF1AKMT1Q8WVE0 214 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 ISOC1Q96CN7 298 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 CINPQ9BW66 212 aaPredicted RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 NUSAP1Q9BXS6 441 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 RPF2Q9H7B2 306 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 SARS2Q9NP81 518 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 TUBA8Q9NY65 449 aaPredicted RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 SEPT3Q9UH03 358 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 SUN2Q9UH99 717 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 TSR3Q9UJK0 312 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 LEF1Q9UJU2 399 aaPredicted RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 A0A0J9YVX5 310 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 TRIM64CA6NLI5 447 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 STX16O14662 325 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 INPPL1O15357 1258 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 TSPAN12O95859 305 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 RPLP2P05387 115 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 ELNP15502 786 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 VARSP26640 1264 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 ARL1P40616 181 aaPredicted RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 STT3AP46977 705 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 C6orf136Q5SQH8 315 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 FAM171A1Q5VUB5 890 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 ALG1LQ6GMV1 187 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 SLC2A7Q6PXP3 512 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 GPRIN3Q6ZVF9 776 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 NKAPQ8N5F7 415 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 DHRSXQ8N5I4 330 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 LPCAT1Q8NF37 534 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 OR52B6Q8NGF0 335 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 BIRC7Q96CA5 298 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 LINGO1Q96FE5 620 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 VPS50Q96JG6 964 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 HBEGFQ99075 208 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 DCUN1D5Q9BTE7 237 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 BRINP2Q9C0B6 783 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 BPIFA1Q9NP55 256 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 SMPD3Q9NY59 655 aaPredicted RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 CD274Q9NZQ7 290 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 UBA2Q9UBT2 640 aaPredicted RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 FKBPLQ9UIM3 349 aa12.96□□□□□ -0.33
LGR5-202ENST00000536515 TRMT6Q9UJA5 497 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 PTBP2Q9UKA9 531 aaKnown RBP12.96□□□□□ -0.33
LGR5-202ENST00000536515 C2orf81A6NN90 581 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 ADAMTS4O75173 837 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 VPS26AO75436 327 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 SNAP29O95721 258 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 MLYCDO95822 493 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 LDLRP01130 860 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 PRLP01236 227 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 PKMP14618 531 aaKnown RBP12.96□□□□□ -0.34
LGR5-202ENST00000536515 HRH2P25021 359 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 RPS9P46781 194 aaKnown RBP12.96□□□□□ -0.34
LGR5-202ENST00000536515 ADARP55265 1226 aaKnown RBP12.96□□□□□ -0.34
LGR5-202ENST00000536515 ERVK-8P63133 956 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 TAF1AQ15573 450 aaPredicted RBP12.96□□□□□ -0.34
LGR5-202ENST00000536515 SPATS1Q496A3 300 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 PYCR3Q53H96 274 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 RALGPS2Q86X27 583 aaPredicted RBP12.96□□□□□ -0.34
LGR5-202ENST00000536515 GPSM1Q86YR5 675 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 CPNE9Q8IYJ1 553 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 TBC1D21Q8IYX1 336 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 EFHBQ8N7U6 833 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 OR56A4Q8NGH8 313 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 GIPC2Q8TF65 315 aa12.96□□□□□ -0.34
LGR5-202ENST00000536515 NUDT8Q8WV74 236 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms