RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 PACSIN1Q9BY11 444 aa16.61■□□□□ 0.25
CAPRIN1-216ENST00000534042 CEP41Q9BYV8 373 aa16.61■□□□□ 0.25
CAPRIN1-216ENST00000534042 PCDHB3Q9Y5E6 796 aa16.61■□□□□ 0.25
CAPRIN1-216ENST00000534042 MRPS18BQ9Y676 258 aaKnown RBP16.61■□□□□ 0.25
CAPRIN1-216ENST00000534042 ZNF487B1APH4 448 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 VEGFDO43915 354 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 RASSF9O75901 435 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 CDK14O94921 469 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 ZNF28P17035 718 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 DLSTP36957 453 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 FOXK1P85037 733 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 CDK18Q07002 472 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 SRSF1Q07955 248 aaKnown RBP eCLIP16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 MESDQ14696 234 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 PDK1Q15118 436 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 IGFBP7Q16270 282 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 LACTB2Q53H82 288 aaPredicted RBP16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 FAM182AQ5T1J6 154 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 ATP1A1-AS1Q5TC04 95 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 CCDC70Q6NSX1 233 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 ABRAXAS1Q6UWZ7 409 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 RASGRP3Q8IV61 690 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 RNF31Q96EP0 1072 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 OR6C1Q96RD1 312 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 SLC25A51Q9H1U9 297 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 KCTD3Q9Y597 815 aa16.6■□□□□ 0.25
CAPRIN1-216ENST00000534042 RP1L1Q8IWN7 2480 aaPredicted RBP16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 APOL1O14791 398 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 PPP1R12AO14974 1030 aaPredicted RBP16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 MTX2O75431 263 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 BPIP17213 487 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 IDSP22304 550 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 F8A1P23610 371 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 RPL10P27635 214 aaKnown RBP16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 CASP14P31944 242 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 LEPRP48357 1165 aaKnown RBP16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 SH3BP2P78314 561 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 IL11RAQ14626 422 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 SLC14A2Q15849 920 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 SLC18A3Q16572 532 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 SLC9A4Q6AI14 798 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 GALNT6Q8NCL4 622 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 CXorf40BQ96DE9 158 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 STAMBPL1Q96FJ0 436 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 SRPK1Q96SB4 655 aaKnown RBP16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 BRD8Q9H0E9 1235 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 ZNF768Q9H5H4 540 aaKnown RBP16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 POT1Q9NUX5 634 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 CROTQ9UKG9 612 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 BSNQ9UPA5 3926 aa16.59■□□□□ 0.25
CAPRIN1-216ENST00000534042 PRR19A6NJB7 356 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 KATNA1O75449 491 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 KIAA0754O94854 1291 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 NDUFA10O95299 355 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 NDST3O95803 873 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 BRAFP15056 766 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 ZFXP17010 805 aaPredicted RBP16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 VCLP18206 1134 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 HNRNPH3P31942 346 aaKnown RBP16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 CAPZBP47756 277 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 UBAP2LQ14157 1087 aaKnown RBP16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 ERV3-1Q14264 604 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 KHDC1Q4VXA5 237 aaKnown RBP16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 CACHD1Q5VU97 1274 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 NPNTQ6UXI9 565 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 WASH2PQ6VEQ5 465 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 PRSS42Q7Z5A4 293 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 VSIG1Q86XK7 387 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 ZNF547Q8IVP9 402 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 RBM12BQ8IXT5 1001 aaKnown RBP16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 GDAP1Q8TB36 358 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 RSC1A1Q92681 617 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 TADA1Q96BN2 335 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 ZDHHC12Q96GR4 267 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 ELMO2Q96JJ3 720 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 GLOD4Q9HC38 313 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 SLC40A1Q9NP59 571 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 WASH6PQ9NQA3 447 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 IFNKQ9P0W0 207 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 ANKMY1Q9P2S6 941 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 TRIM10Q9UDY6 481 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 LNPEPQ9UIQ6 1025 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.58■□□□□ 0.243e-13■□□□□ 10.2
CAPRIN1-216ENST00000534042 KCNMB2Q9Y691 235 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 LRRK2Q5S007 2527 aa16.58■□□□□ 0.24
CAPRIN1-216ENST00000534042 SYCE3A1L190 88 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 C3orf70A6NLC5 250 aaPredicted RBP16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 OR52A4PA6NMU1 304 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 KIF1CO43896 1103 aaKnown RBP16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 PMPCBO75439 489 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 MT-CYBP00156 380 aaPredicted RBP16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 TMEM253P0C7T8 217 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 CCNYL3P0C7X3 344 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 DRG2P55039 364 aaKnown RBP16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 TMEM115Q12893 351 aaPredicted RBP16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 KLRB1Q12918 225 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 GTF2H3Q13889 308 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 GPR18Q14330 331 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 ODF2Q5BJF6 829 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms