RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 TTC34A8MYJ7 566 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 NEDD8-MDP1E9PL57 170 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 IFRD1O00458 451 aaPredicted RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 DNAJA2O60884 412 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 TSC22D2O75157 780 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 CNTN5O94779 1100 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 ZNF12P17014 697 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 AQP4P55087 323 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 CREB5Q02930 508 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 SULT2A1Q06520 285 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 GPR107Q5VW38 600 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 BBS7Q8IWZ6 715 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 STX19Q8N4C7 294 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 TMEM40Q8WWA1 233 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 PANX1Q96RD7 426 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 STN1Q9H668 368 aaKnown RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 LIN28AQ9H9Z2 209 aaKnown RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 PRPF19Q9UMS4 504 aaKnown RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 LOC100506127A0A0U1RQW1 187 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 PIP5K1BO14986 540 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 TYROBPO43914 113 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 FAM20BO75063 409 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 CLDN11O75508 207 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 KCNH1O95259 989 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 ZNF37AP17032 561 aaPredicted RBP12.15□□□□□ -0.47
BDNF-218ENST00000533246 FBXW4P57775 412 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 FKBP1BP68106 108 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 XKR6Q5GH73 641 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 KLHDC10Q6PID8 442 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 TMEM132CQ8N3T6 1108 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 CLDN19Q8N6F1 224 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.15□□□□□ -0.47
BDNF-218ENST00000533246 EBF3Q9H4W6 596 aa12.15□□□□□ -0.47
BDNF-218ENST00000533246 FAM159BA6NKW6 160 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 SCAMP1O15126 338 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 MAGEC1O60732 1142 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 NIPSNAP2O75323 286 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 CXCL14O95715 111 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 UQCRBP14927 111 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 CYP3A5P20815 502 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 ATP6V0D1P61421 351 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 CLCQ05315 142 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 IRF5Q13568 498 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 ZNF423Q2M1K9 1284 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 OFCC1Q8IZS5 231 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 RORBQ92753 470 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 NPY6RQ99463 290 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 IPPKQ9H8X2 491 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 SSU72Q9NP77 194 aaKnown RBP12.14□□□□□ -0.47
BDNF-218ENST00000533246 ASAH2Q9NR71 780 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 MRPS23Q9Y3D9 190 aaKnown RBP12.14□□□□□ -0.47
BDNF-218ENST00000533246 PRAMEF1O95521 474 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 CST1P01037 141 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 XRCC1P18887 633 aaPredicted RBP12.14□□□□□ -0.47
BDNF-218ENST00000533246 WASP42768 502 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 YBEYP58557 167 aaPredicted RBP12.14□□□□□ -0.47
BDNF-218ENST00000533246 COPZ1P61923 177 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 INCA1Q0VD86 236 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 NOGQ13253 232 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 SLC9A4Q6AI14 798 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 CRTC3Q6UUV7 619 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 SERPINA13PQ6UXR4 307 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 GPR180Q86V85 440 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 SIDT2Q8NBJ9 832 aaKnown RBP12.14□□□□□ -0.47
BDNF-218ENST00000533246 LRTOMTQ8WZ04 291 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 ZNF717Q9BY31 904 aaPredicted RBP12.14□□□□□ -0.47
BDNF-218ENST00000533246 ZDHHC2Q9UIJ5 367 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 CNTN6Q9UQ52 1028 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 TRIM64A6NGJ6 449 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 TRIM64BA6NI03 449 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 DLX3O60479 287 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 SNAP91O60641 907 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 OTCP00480 354 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 ZNF132P52740 706 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 HK2P52789 917 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 THOP1P52888 689 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 ENPEPQ07075 957 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 MAD2L1Q13257 205 aaPredicted RBP12.14□□□□□ -0.47
BDNF-218ENST00000533246 ZC3H7AQ8IWR0 971 aaKnown RBP12.14□□□□□ -0.47
BDNF-218ENST00000533246 CBR4Q8N4T8 237 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 PYCR2Q96C36 320 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 NEK6Q9HC98 313 aa12.14□□□□□ -0.47
BDNF-218ENST00000533246 FBRSL1Q9HCM7 1045 aaKnown RBP12.14□□□□□ -0.47
BDNF-218ENST00000533246 FAM47E-STBD1D6RA91 191 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 DBTP11182 482 aaKnown RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 RRM2P31350 389 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 ACADVLP49748 655 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 MLLT6P55198 1093 aaPredicted RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 CYP4F2P78329 520 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 CYP4F3Q08477 520 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 RAET1GQ6H3X3 334 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 TYW3Q6IPR3 259 aaKnown RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 TAPT1Q6NXT6 567 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 FAM20CQ8IXL6 584 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 C6orf62Q9GZU0 229 aaPredicted RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 KRT84Q9NSB2 600 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 GNPTGQ9UJJ9 305 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 H0Y858 1186 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 RFXANKO14593 260 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms