RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-208ENST00000533062 TTC25Q96NG3 672 aa11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 PPP1R2P1Q96PQ5 205 aa11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 NUDT22Q9BRQ3 303 aa11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 FRMD8P1Q9BZ68 369 aaPredicted RBP11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 ASB8Q9H765 288 aa11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 SMARCAL1Q9NZC9 954 aa11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 SCHIP1Q9P0W5 487 aaPredicted RBP11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 DKK4Q9UBT3 224 aa11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 RALYQ9UKM9 306 aaKnown RBP11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 ITPR1Q14643 2758 aa11.32□□□□□ -0.6
CHORDC1-208ENST00000533062 PRAMEF33A0A0G2JMD5 474 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 A6NCN8 305 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 KMOO15229 486 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 PPFIA2O75334 1257 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 SRP72O76094 671 aaKnown RBP11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 CD1CP29017 333 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 AKT1P31749 480 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 RPL22P35268 128 aaKnown RBP11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 ACTN2P35609 894 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 LMAN1P49257 510 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 PPM1FP49593 454 aaPredicted RBP11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 CDKN1CP49918 316 aaPredicted RBP11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 TERF1P54274 439 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 DRG2P55039 364 aaKnown RBP11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 INHBCP55103 352 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 ITGA9Q13797 1035 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 GTF2H3Q13889 308 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 CCNG2Q16589 344 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 MAP9Q49MG5 647 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 LDLRAP1Q5SW96 308 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 FNBP1LQ5T0N5 605 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 IYDQ6PHW0 289 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 TMEM220Q6QAJ8 160 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 ZNF574Q6ZN55 896 aaPredicted RBP11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 ZNF438Q7Z4V0 828 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 C11orf96Q7Z7L8 435 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 SLC35F6Q8N357 371 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 SFRP1Q8N474 314 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 DNAAF3Q8N9W5 541 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 DDHD1Q8NEL9 900 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 UBE2Q2Q8WVN8 375 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 HNRNPLLQ8WVV9 542 aaKnown RBP11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 LRRC45Q96CN5 670 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 SGF29Q96ES7 293 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 PRR11Q96HE9 360 aaPredicted RBP11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 SEMA6CQ9H3T2 930 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 POLR1BQ9H9Y6 1135 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 RAB6BQ9NRW1 208 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 KCNK4Q9NYG8 393 aa11.31□□□□□ -0.6
CHORDC1-208ENST00000533062 IGHV1OR21-1A0A087WYE8 117 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 USP27XA6NNY8 438 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 PDZK1P1A8MUH7 402 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 GPR89AB7ZAQ6 455 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 E7EVH7 732 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 PSMD3O43242 534 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 POP7O75817 140 aaKnown RBP11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 GPR89BP0CG08 455 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 F3P13726 295 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 HOXB3P14651 431 aaPredicted RBP11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 MSH3P20585 1137 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 PBLDP30039 288 aaPredicted RBP11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 MC4RP32245 332 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 MAPK9P45984 424 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 LSSP48449 732 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 PDE1BQ01064 536 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 HHEXQ03014 270 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 CFHR1Q03591 330 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 NR1D2Q14995 579 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 TRIP13Q15645 432 aaPredicted RBP11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 PHF19Q5T6S3 580 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 FAM83HQ6ZRV2 1179 aaPredicted RBP11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 GSTA5Q7RTV2 222 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 PIM3Q86V86 326 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 PRELID2Q8N945 189 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 RCBTB1Q8NDN9 531 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 DTX3LQ8TDB6 740 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 NAF1Q96HR8 494 aaKnown RBP11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 SLC38A3Q99624 504 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 TIMM29Q9BSF4 260 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 TMEM9Q9P0T7 183 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 FAM8A1Q9UBU6 413 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 CRLS1Q9UJA2 301 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 WDR37Q9Y2I8 494 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 JRKLQ9Y4A0 524 aa11.3□□□□□ -0.6
CHORDC1-208ENST00000533062 ACACAQ13085 2346 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 IGHV5-10-1A0A0J9YXX1 117 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 OR51F1A6NGY5 319 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 PRR19A6NJB7 356 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 OR52A4PA6NMU1 304 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 ZSCAN12O43309 604 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 TNFSF15O95150 251 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 CPNE6O95741 557 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 APRTP07741 180 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 BRAFP15056 766 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 ITPKBP27987 946 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 CSF2RBP32927 897 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 FDFT1P37268 417 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 HADHAP40939 763 aa11.29□□□□□ -0.6
CHORDC1-208ENST00000533062 GPR3P46089 330 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms