RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SRRDQ9UH36 339 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 A0A1B0GUL6 1792 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 H3BM21 787 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 OCM2P0CE71 109 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 OCMP0CE72 109 aaPredicted RBP15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 ITGA2P17301 1181 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 DGUOKQ16854 277 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 CCDC142Q17RM4 750 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 RBM20Q5T481 1227 aaKnown RBP15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 CAPN13Q6MZZ7 669 aaPredicted RBP15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 TRIM40Q6P9F5 258 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 AGMOQ6ZNB7 445 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 BNIPLQ7Z465 357 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 SLC47A1Q96FL8 570 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 ATG10Q9H0Y0 220 aa15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 RSL24D1Q9UHA3 163 aaKnown RBP15.18■□□□□ 0.02
PCDHA3-202ENST00000532566 TTC24A2A3L6 582 aaPredicted RBP15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 EME2A4GXA9 379 aaPredicted RBP15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 ATG13O75143 517 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 SIX3O95343 332 aaPredicted RBP15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 SLC35G4P0C7Q5 338 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 UMPSP11172 480 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 IMPDH2P12268 514 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 PRKAG1P54619 331 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 C21orf59P57076 290 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 GPR17Q13304 367 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 MOGSQ13724 837 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 LIN52Q52LA3 116 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 TYW3Q6IPR3 259 aaKnown RBP15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 LEMD2Q8NC56 503 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 RPL10LQ96L21 214 aaKnown RBP15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 AARSD1Q9BTE6 412 aaKnown RBP15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 COPG1Q9Y678 874 aaKnown RBP15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 DNAJA2O60884 412 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 NSG1P42857 185 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 MS4A13Q5J8X5 152 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 CDK20Q8IZL9 346 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 CSGALNACT1Q8TDX6 532 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 FAIM2Q9BWQ8 316 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 TDRD1Q9BXT4 1180 aaKnown RBP15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 ARMC7Q9H6L4 198 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 CACNA2D2Q9NY47 1150 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 KLHL3Q9UH77 587 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 SAMD4AQ9UPU9 718 aaKnown RBP15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 DPPA5A6NC42 116 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 CCL16O15467 120 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 ETS2P15036 469 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 MAPK9P45984 424 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 UPP1Q16831 310 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 RAB6CQ53S08 254 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 C6orf52Q5T4I8 152 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 RNF220Q5VTB9 566 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 C10orf53Q8N6V4 93 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 DENND1AQ8TEH3 1009 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 RAB6CQ9H0N0 254 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 DEC1Q9P2X7 70 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 ZDHHC2Q9UIJ5 367 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 MAST2Q6P0Q8 1798 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 ELOVL7A1L3X0 281 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 NIPSNAP2O75323 286 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 TRBC1P01850 177 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 ITGAXP20702 1163 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 THOP1P52888 689 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 PRMT2P55345 433 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 NAE1Q13564 534 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 LPIN1Q14693 890 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 CPTPQ5TA50 214 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 CRTC3Q6UUV7 619 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 CDHR3Q6ZTQ4 885 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 CHST9Q7L1S5 443 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 SERINC5Q86VE9 423 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 ZFP28Q8NHY6 868 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 ACAT2Q9BWD1 397 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 C1orf21Q9H246 121 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 SGK2Q9HBY8 427 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 YIPF1Q9Y548 306 aa15.17■□□□□ 0.02
PCDHA3-202ENST00000532566 ADAMTS7Q9UKP4 1686 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 DCLK1O15075 740 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 ZNF623O75123 536 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 HNF4AP41235 474 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 ADGRE1Q14246 886 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 FRMD7Q6ZUT3 714 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 ZNF438Q7Z4V0 828 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 DNAJB7Q7Z6W7 309 aaPredicted RBP15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 CBR4Q8N4T8 237 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 KBTBD7Q8WVZ9 684 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 AP2M1Q96CW1 435 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 NDEL1Q9GZM8 345 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 MOCS1Q9NZB8 636 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 A0A088AWK7 358 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 FAM149AA5PLN7 773 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 G3V2T6 193 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 CNMDO75829 334 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 HPGDP15428 266 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 ZNF10P21506 573 aaPredicted RBP15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 IFNGR2P38484 337 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 MAGEA11P43364 429 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 AQP4P55087 323 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 CDC42P60953 191 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms