RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 KMOO15229 486 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 CASC3O15234 703 aaKnown RBP11.71□□□□□ -0.53
LTBP3-219ENST00000530990 AVILO75366 819 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 EML2O95834 649 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 GP1BAP07359 652 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 MSH3P20585 1137 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 FOXN2P32314 431 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 B4GALNT1Q00973 533 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 DR1Q01658 176 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 ACVR1Q04771 509 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 CACNG1Q06432 222 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 LAMB3Q13751 1172 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 HLTFQ14527 1009 aaKnown RBP eCLIP11.71□□□□□ -0.53
LTBP3-219ENST00000530990 SKIDA1Q1XH10 827 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 C14orf28Q4W4Y0 310 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 PCID2Q5JVF3 399 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 DET1Q7L5Y6 550 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 C11orf96Q7Z7L8 435 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 PIANPQ8IYJ0 282 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 NAGSQ8N159 534 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 NAT8LQ8N9F0 302 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 NAT6Q93015 286 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 CCDC74AQ96AQ1 378 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 ULK4Q96C45 1275 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 TTC25Q96NG3 672 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 TIMM29Q9BSF4 260 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 TRIM51Q9BSJ1 452 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 IL22Q9GZX6 179 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 OSGEPL1Q9H4B0 414 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 CHRAC1Q9NRG0 131 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 KLC4Q9NSK0 619 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 BFARQ9NZS9 450 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 SLC23A2Q9UGH3 650 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 RABGEF1Q9UJ41 708 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 RIMKLBQ9ULI2 386 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 DNAJC16Q9Y2G8 782 aa11.71□□□□□ -0.53
LTBP3-219ENST00000530990 A6NCN8 305 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 AP3B1O00203 1094 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 DNALI1O14645 258 aaPredicted RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 TTI1O43156 1089 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 GOT2P00505 430 aaKnown RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 ZNF7P17097 686 aaPredicted RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 ACRV1P26436 265 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 NMBRP28336 390 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 PBLDP30039 288 aaPredicted RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 NPY2RP49146 381 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 SHC2P98077 582 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 INSM1Q01101 510 aaPredicted RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 C2orf54Q08AI8 447 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 SMAD1Q15797 465 aaKnown RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 GPR33Q49SQ1 333 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 RNASEH2BQ5TBB1 312 aaKnown RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 HES3Q5TGS1 186 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 TMEM220Q6QAJ8 160 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 AFTPHQ6ULP2 937 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 NLRP9Q7RTR0 991 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 TAS2R42Q7RTR8 314 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 CAND1Q86VP6 1230 aaKnown RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 SERPINA9Q86WD7 417 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 C17orf82Q86X59 251 aaPredicted RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 MARCH9Q86YJ5 346 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 JAMLQ86YT9 394 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 PPIL6Q8IXY8 311 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 MPP5Q8N3R9 675 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 BEND7Q8N7W2 519 aaPredicted RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 MCUQ8NE86 351 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 MAPK15Q8TD08 544 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 HDAC10Q969S8 669 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 TRIM44Q96DX7 344 aaPredicted RBP11.7□□□□□ -0.54
LTBP3-219ENST00000530990 RUNDC3BQ96NL0 473 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 SERPINB12Q96P63 405 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 KRT12Q99456 494 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 COPS8Q99627 209 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 CCDC3Q9BQI4 270 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 TREX1Q9NSU2 369 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 TBC1D29Q9UFV1 150 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 ANGPTL2Q9UKU9 493 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 RNF215Q9Y6U7 377 aa11.7□□□□□ -0.54
LTBP3-219ENST00000530990 IGLV3-16A0A075B6K0 115 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 FAM149AA5PLN7 773 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 PRR19A6NJB7 356 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 SGTAO43765 313 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 OPA1O60313 960 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 SNX2O60749 519 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 CDK4P11802 303 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 GLB1P16278 677 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 CLCNKAP51800 687 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 PRAMEP78395 509 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 SARNPP82979 210 aaKnown RBP11.69□□□□□ -0.54
LTBP3-219ENST00000530990 SEPT7Q16181 437 aaKnown RBP11.69□□□□□ -0.54
LTBP3-219ENST00000530990 DBN1Q16643 649 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 FNBP1LQ5T0N5 605 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 IZUMO3Q5VZ72 239 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 CES3Q6UWW8 571 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 TMPRSS7Q7RTY8 843 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 AGGF1Q8N302 714 aaeCLIP11.69□□□□□ -0.54
LTBP3-219ENST00000530990 ARL14Q8N4G2 192 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 SLC37A2Q8TED4 501 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 PEX13Q92968 403 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 MFSD3Q96ES6 412 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms