RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 KLK6Q92876 244 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 OTULINQ96BN8 352 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 PLEKHA8Q96JA3 519 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 AIF1LQ9BQI0 150 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 NOL11Q9H8H0 719 aaKnown RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 ACSS2Q9NR19 701 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 TMCC3Q9ULS5 477 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 NENFQ9UMX5 172 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 INVSQ9Y283 1065 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 RASGRP1O95267 797 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 HNRNPH1P31943 449 aaKnown RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 VAC14Q08AM6 782 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 QPCTQ16769 361 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 AP5B1Q2VPB7 878 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 METTL21CQ5VZV1 264 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 CHST15Q7LFX5 561 aaPredicted RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 MRPL43Q8N983 215 aaKnown RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 MCOLN1Q9GZU1 580 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 KLHL28Q9NXS3 571 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 AKAP7Q9P0M2 348 aaPredicted RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 COLEC10Q9Y6Z7 277 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 CLDN9O95484 217 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 HPGDP15428 266 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 EPCAMP16422 314 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 AKT2P31751 481 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 SLC25A3Q00325 362 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 SPIDRQ14159 915 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 LRRC66Q68CR7 880 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 LHX8Q68G74 356 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 TMPRSS11BQ86T26 416 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 GPR180Q86V85 440 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 ARFGAP1Q8N6T3 406 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 RERGQ96A58 199 aaPredicted RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 C19orf60Q96EN9 201 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 ADAM7Q9H2U9 754 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 MYH15Q9Y2K3 1946 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 GNPDA1P46926 289 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 NTHL1P78549 312 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 KLC1Q07866 573 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 AMZ2Q86W34 360 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 GPR22Q99680 433 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 CCT7Q99832 543 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 TRIT1Q9H3H1 467 aaKnown RBP14.92□□□□□ -0.02
USP47-207ENST00000527733 B4GALT6Q9UBX8 382 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 H0Y858 1186 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 ZMPSTE24O75844 475 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 CCNDBP1O95273 360 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 FASP25445 335 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 PIK3R1P27986 724 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 RGS1Q08116 209 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 SF1Q15637 639 aaKnown RBP14.92□□□□□ -0.02
USP47-207ENST00000527733 FBXO48Q5FWF7 155 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 CHSY3Q70JA7 882 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 SEPHS2Q99611 448 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 CCDC28BQ9BUN5 200 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 WDR26Q9H7D7 661 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 SGK2Q9HBY8 427 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 HSFX1Q9UBD0 423 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 TIMM22Q9Y584 194 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 NPHS1O60500 1241 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 HLA-EP13747 358 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 HOXB2P14652 356 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 CCT8P50990 548 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 RTN4RL1Q86UN2 441 aaPredicted RBP14.92□□□□□ -0.02
USP47-207ENST00000527733 CYP4Z1Q86W10 505 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 IGDCC3Q8IVU1 814 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 EFCAB3Q8N7B9 438 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 TSTD1Q8NFU3 115 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 ACTRT2Q8TDY3 377 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 HMGB4Q8WW32 186 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 AARSD1Q9BTE6 412 aaKnown RBP14.92□□□□□ -0.02
USP47-207ENST00000527733 RHBGQ9H310 441 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 PCDH12Q9NPG4 1184 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 LIMD1Q9UGP4 676 aa14.92□□□□□ -0.02
USP47-207ENST00000527733 ZNF490Q9ULM2 529 aaPredicted RBP14.92□□□□□ -0.02
USP47-207ENST00000527733 E7ESA3 106 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 ADAM12O43184 909 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 PGLSO95336 258 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 ATP6V1B2P21281 511 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 WDR4P57081 412 aaKnown RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 PSME3P61289 254 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 EIF4HQ15056 248 aaKnown RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 LRIG1Q96JA1 1093 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 SPACA7Q96KW9 195 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 CDCA3Q99618 268 aaPredicted RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 KXD1Q9BQD3 176 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 ZNF358Q9NW07 568 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 FBXL12Q9NXK8 326 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 SEC24AO95486 1093 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 STK19P49842 368 aaPredicted RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 STC1P52823 247 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 DHCR24Q15392 516 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 CYP2R1Q6VVX0 501 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 DPY19L3Q6ZPD9 716 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 TWIST2Q8WVJ9 160 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 PEX13Q92968 403 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 MRGPRX2Q96LB1 330 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 CCDC177Q9NQR7 707 aaPredicted RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 IQCF5A8MTL0 148 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 SLC22A3O75751 556 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms