RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 CDK18Q07002 472 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 EPS8Q12929 822 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 PTGR1Q14914 329 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 MED22Q15528 200 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ZBED5Q49AG3 693 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 FAM171A1Q5VUB5 890 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC15A3Q8IY34 581 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SELENOMQ8WWX9 145 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 BIRC7Q96CA5 298 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SMOQ99835 787 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 KCNS3Q9BQ31 491 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 BEX2Q9BXY8 128 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ATG10Q9H0Y0 220 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 MRGBPQ9NV56 204 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 RBPJLQ9UBG7 517 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 RIMS3Q9UJD0 308 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 TPRKBQ9Y3C4 175 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 PCDHGA7Q9Y5G6 932 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 CEPT1Q9Y6K0 416 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 E9PAM4 449 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 F8W810 466 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF197O14709 1029 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ANXA6P08133 673 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 CAPN3P20807 821 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 GABRB3P28472 473 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 MC4RP32245 332 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 HNF4AP41235 474 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 RFX3P48380 749 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 CDKN2DP55273 166 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SH3BP2P78314 561 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 CLDN10P78369 228 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF177Q13360 481 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 FSCN1Q16658 493 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF772Q68DY9 489 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ANKRD34AQ69YU3 496 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 PGM2L1Q6PCE3 622 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 TIFABQ6ZNK6 161 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 THAP5Q7Z6K1 395 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 DENND1CQ8IV53 801 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC22A15Q8IZD6 547 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 FNDC8Q8TC99 324 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 NACC2Q96BF6 587 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 APOLD1Q96LR9 279 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 NODALQ96S42 347 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 VAT1Q99536 393 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 COPS4Q9BT78 406 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 PRKD2Q9BZL6 878 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 TNFRSF12AQ9NP84 129 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC38A7Q9NVC3 462 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 FKBPLQ9UIM3 349 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 BTBD3Q9Y2F9 522 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 OR1I1O60431 355 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 OPN1SWP03999 348 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 RHOCP08134 193 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 DARSP14868 501 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SMPD1P17405 629 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 CD247P20963 164 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 AGXTP21549 392 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 GTF2E2P29084 291 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 BMXP51813 675 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 RPS3AP61247 264 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 RHOAP61586 193 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 TAF1CQ15572 869 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 FAM214AQ32MH5 1076 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 TIGD5Q53EQ6 642 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 TSTD2Q5T7W7 516 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 PRMT9Q6P2P2 845 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 GLB1LQ6UWU2 654 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 TPGS1Q6ZTW0 290 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ATP6V0D2Q8N8Y2 350 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 Q8N9G6 341 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC47A1Q96FL8 570 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SNX27Q96L92 541 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 GMLQ99445 158 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 TMLHEQ9NVH6 421 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ARL15Q9NXU5 204 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 GMIPQ9P107 970 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 ITGB1BP2Q9UKP3 347 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 PDE10AQ9Y233 779 aa6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 SIPA1L3O60292 1781 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-207ENST00000525962 HAPLN1P10915 354 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 G6PDP11413 515 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 GLDCP23378 1020 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TTKP33981 857 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 POLD2P49005 469 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 GLUD2P49448 558 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CDKN1CP49918 316 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 COPZ1P61923 177 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ALDH6A1Q02252 535 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CSTF3Q12996 717 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TUBB3Q13509 450 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 DDI2Q5TDH0 399 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ERMP1Q7Z2K6 904 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ADHFE1Q8IWW8 467 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 LRRC52Q8N7C0 313 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 PIK3C3Q8NEB9 887 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 POLR1EQ9GZS1 481 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CRTAC1Q9NQ79 661 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CTPS2Q9NRF8 586 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms