RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 NFKBIL1Q9UBC1 381 aaPredicted RBP12.11□□□□□ -0.47
BRF2-204ENST00000522539 SLC23A2Q9UGH3 650 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 ZKSCAN5Q9Y2L8 839 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
BRF2-204ENST00000522539 C1orf232A0A0U1RR37 186 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 ANKRD66B4E2M5 251 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 MATN3O15232 486 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 KIF1CO43896 1103 aaKnown RBP12.1□□□□□ -0.47
BRF2-204ENST00000522539 TIAF1O95411 115 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 VIPP01282 170 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 CCNYL3P0C7X3 344 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 MYBL1P10243 752 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 BRAFP15056 766 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 TYRP1P17643 537 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 PRKCIP41743 596 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 SEPHS1P49903 392 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 NIPAL4Q0D2K0 466 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 QPCTQ16769 361 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 NADK2Q4G0N4 442 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 ANKRD20A8PQ5CZ79 823 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 WASH2PQ6VEQ5 465 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 ZNF517Q6ZMY9 492 aaPredicted RBP12.1□□□□□ -0.47
BRF2-204ENST00000522539 ZNF571Q7Z3V5 609 aaPredicted RBP12.1□□□□□ -0.47
BRF2-204ENST00000522539 PPP1R3BQ86XI6 285 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 RBM12BQ8IXT5 1001 aaKnown RBP12.1□□□□□ -0.47
BRF2-204ENST00000522539 NIPA2Q8N8Q9 360 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 THAP4Q8WY91 577 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 HSPH1Q92598 858 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 RNF31Q96EP0 1072 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 SLC41A2Q96JW4 573 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 TSGA13Q96PP4 275 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 GPR87Q9BY21 358 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 OR2AG1Q9H205 316 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 ACTL8Q9H568 366 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 PCDH9Q9HC56 1237 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 TRIM39Q9HCM9 518 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 SLC40A1Q9NP59 571 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 WASH6PQ9NQA3 447 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 PKD2L2Q9NZM6 624 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 LNPEPQ9UIQ6 1025 aa12.1□□□□□ -0.47
BRF2-204ENST00000522539 TNRC6AQ8NDV7 1962 aaKnown RBP12.09□□□□□ -0.47
BRF2-204ENST00000522539 A0A1B0GTH6 734 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 WIPF3A6NGB9 483 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 ENO4A6NNW6 628 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 DDX3XO00571 662 aaKnown RBP eCLIP12.09□□□□□ -0.472e-12■■■□□ 16.8
BRF2-204ENST00000522539 MFSD11O43934 449 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 CEACAM4O75871 244 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 DDAH2O95865 285 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 AMD1P17707 334 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 CA4P22748 312 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 CCNCP24863 283 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 ARSEP51690 589 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 PGDP52209 483 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 DCDC1P59894 354 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 ITKQ08881 620 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 PAFAH1B3Q15102 231 aaKnown RBP12.09□□□□□ -0.47
BRF2-204ENST00000522539 AGAP9Q5VTM2 703 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 CACHD1Q5VU97 1274 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 E4F1Q66K89 784 aaPredicted RBP12.09□□□□□ -0.47
BRF2-204ENST00000522539 PDPK2PQ6A1A2 396 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 CYB5D1Q6P9G0 228 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 ADGRG6Q86SQ4 1221 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 ZNF547Q8IVP9 402 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 VSTM4Q8IW00 320 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 ZNF653Q96CK0 615 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 ZDHHC12Q96GR4 267 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 RUFY1Q96T51 708 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 TIMM29Q9BSF4 260 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 SLC25A23Q9BV35 468 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 ISCUQ9H1K1 167 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 HAUS4Q9H6D7 363 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 AKIRIN1Q9H9L7 192 aaPredicted RBP12.09□□□□□ -0.47
BRF2-204ENST00000522539 MRPL47Q9HD33 250 aaKnown RBP12.09□□□□□ -0.47
BRF2-204ENST00000522539 RBM22Q9NW64 420 aaKnown RBP eCLIP12.09□□□□□ -0.47
BRF2-204ENST00000522539 DTLQ9NZJ0 730 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 AIPL1Q9NZN9 384 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 PCDHGB7Q9Y5F8 929 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 CACNA1DQ01668 2161 aa12.09□□□□□ -0.47
BRF2-204ENST00000522539 CSMD1Q96PZ7 3565 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 MED13Q9UHV7 2174 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 LRRC53A6NM62 1247 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 NRDCO43847 1150 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 RASSF9O75901 435 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 MTA2O94776 668 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 HLA-DQB2P05538 268 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 MMP2P08253 660 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 ZNF7P17097 686 aaPredicted RBP12.08□□□□□ -0.48
BRF2-204ENST00000522539 LPOP22079 712 aaPredicted RBP12.08□□□□□ -0.48
BRF2-204ENST00000522539 PTPN4P29074 926 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 CASP14P31944 242 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 GPR18Q14330 331 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 PIGHQ14442 188 aaPredicted RBP12.08□□□□□ -0.48
BRF2-204ENST00000522539 IFI16Q16666 785 aaKnown RBP12.08□□□□□ -0.48
BRF2-204ENST00000522539 ZNF569Q5MCW4 686 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 ZNF648Q5T619 568 aaPredicted RBP12.08□□□□□ -0.48
BRF2-204ENST00000522539 CPZQ66K79 652 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 NCBP2-AS2Q69YL0 99 aa12.08□□□□□ -0.48
BRF2-204ENST00000522539 TIGD7Q6NT04 549 aaPredicted RBP12.08□□□□□ -0.48
BRF2-204ENST00000522539 PWWP2BQ6NUJ5 590 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms