RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 FSCN3Q9NQT6 498 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 C20orf96Q9NUD7 363 aaPredicted RBP17.2■□□□□ 0.34
TRAM1-203ENST00000520700 DNAJC28Q9NX36 388 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 MARCH4Q9P2E8 410 aaPredicted RBP17.2■□□□□ 0.34
TRAM1-203ENST00000520700 SUFUQ9UMX1 484 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 VPS9D1Q9Y2B5 631 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 CABIN1Q9Y6J0 2220 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 FRYLO94915 3013 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 FAM186AA6NE01 2351 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 QSOX1O00391 747 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 KMOO15229 486 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 GRID2O43424 1007 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 SGTAO43765 313 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 GFRA3O60609 400 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 PIAS2O75928 621 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 GSTM1P09488 218 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 PRSS56P0CW18 603 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 ZNF7P17097 686 aaPredicted RBP17.19■□□□□ 0.34
TRAM1-203ENST00000520700 CCT8P50990 548 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 CLCNKAP51800 687 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 ATXN3P54252 364 aaPredicted RBP17.19■□□□□ 0.34
TRAM1-203ENST00000520700 GSTM4Q03013 218 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 GTF2H3Q13889 308 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 LRP8Q14114 963 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 SEMA3AQ14563 771 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 BCL7AQ4VC05 210 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 PRAMEF14Q5SWL7 426 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 KCTD16Q68DU8 428 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 KIAA0408Q6ZU52 694 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 C3orf62Q6ZUJ4 267 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 KCNMB4Q86W47 210 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 CCDC25Q86WR0 208 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 LRRC6Q86X45 466 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 HID1Q8IV36 788 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 RBFAQ8N0V3 343 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 FSTL5Q8N475 847 aaPredicted RBP17.19■□□□□ 0.34
TRAM1-203ENST00000520700 GPBAR1Q8TDU6 330 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 SAP25Q8TEE9 199 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 CFAP36Q96G28 342 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 PDXPQ96GD0 296 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 LINC00615Q96LM1 132 aaPredicted RBP17.19■□□□□ 0.34
TRAM1-203ENST00000520700 FUT8Q9BYC5 575 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 CARS2Q9HA77 564 aaKnown RBP17.19■□□□□ 0.34
TRAM1-203ENST00000520700 LRRC4CQ9HCJ2 640 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 CYP4F12Q9HCS2 524 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 MRPL40Q9NQ50 206 aaKnown RBP17.19■□□□□ 0.34
TRAM1-203ENST00000520700 INTS10Q9NVR2 710 aaKnown RBP17.19■□□□□ 0.34
TRAM1-203ENST00000520700 SPASTQ9UBP0 616 aa17.19■□□□□ 0.34
TRAM1-203ENST00000520700 ZNF292O60281 2723 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 F8W8V4 182 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 MTX2O75431 263 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 S1PR4O95977 384 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 RPS3P23396 243 aaKnown RBP eCLIP17.18■□□□□ 0.348e-23■□□□□ 10
TRAM1-203ENST00000520700 DGKAP23743 735 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 MCM3P25205 808 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 EPHA8P29322 1005 aaPredicted RBP17.18■□□□□ 0.34
TRAM1-203ENST00000520700 PMLP29590 882 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 AKT1P31749 480 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 LIMK1P53667 647 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 GPX6P59796 221 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 MGAT5Q09328 741 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 ILF2Q12905 390 aaKnown RBP17.18■□□□□ 0.34
TRAM1-203ENST00000520700 HSP90AA5PQ58FG0 334 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 ZNF648Q5T619 568 aaPredicted RBP17.18■□□□□ 0.34
TRAM1-203ENST00000520700 TEDDM1Q5T9Z0 273 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 DOK6Q6PKX4 331 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 LVRNQ6Q4G3 990 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 MICALCLQ6ZW33 695 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 C11orf96Q7Z7L8 435 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 LRRTM4Q86VH4 590 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 GALNT13Q8IUC8 556 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 ZNF547Q8IVP9 402 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 C9orf72Q96LT7 481 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 OR2M4Q96R27 311 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 TIMM29Q9BSF4 260 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 EDEM2Q9BV94 578 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 GTPBP2Q9BX10 602 aaKnown RBP17.18■□□□□ 0.34
TRAM1-203ENST00000520700 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 P2RY12Q9H244 342 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 IL21RQ9HBE5 538 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 ARFGAP3Q9NP61 516 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 TMEM9BQ9NQ34 198 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 TM7SF3Q9NS93 570 aa17.18■□□□□ 0.34
TRAM1-203ENST00000520700 APOBEC3BQ9UH17 382 aaKnown RBP17.18■□□□□ 0.34
TRAM1-203ENST00000520700 PLXNB3Q9ULL4 1909 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 BPTFQ12830 3046 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 C17orf113A0A1B0GUU1 675 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 PRR19A6NJB7 356 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 PRMT5O14744 637 aaPredicted RBP17.17■□□□□ 0.34
TRAM1-203ENST00000520700 TPP1O14773 563 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 NDUFS3O75489 264 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 ERVK-10P10266 1014 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 SSTR1P30872 391 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 LEPRP48357 1165 aaKnown RBP17.17■□□□□ 0.34
TRAM1-203ENST00000520700 BNIP3Q12983 259 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 SUZ12Q15022 739 aaKnown RBP17.17■□□□□ 0.34
TRAM1-203ENST00000520700 ELOCQ15369 112 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 ERCC6LQ2NKX8 1250 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 ZNF542PQ5EBM4 170 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 TRMT10BQ6PF06 316 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms