RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 PCDHGA2Q9Y5H1 932 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 SNX13Q9Y5W8 968 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 DHRS12A0PJE2 317 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 E7ENX8 843 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 GOLGA8TH3BQL2 631 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 NRG2O14511 850 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 PFDN1O60925 122 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 PMPCBO75439 489 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 BEST1O76090 585 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 MATN4O95460 622 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 CHEK2O96017 543 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 C1RP00736 705 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 IGLV3-25P01717 112 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 HLA-DQB2P05538 268 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 UMPSP11172 480 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 HSD17B1P14061 328 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 IDO1P14902 403 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ZNF26P17031 533 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 PTPN2P17706 415 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 OGNP20774 298 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 FGFR3P22607 806 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 FASP25445 335 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 GDI1P31150 447 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 HOXA9P31269 272 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 RANBP1P43487 201 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 GCGRP47871 477 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ALDH3B2P48448 385 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 SLC7A2P52569 658 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 WNT3AP56704 352 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 USP46P62068 366 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 HERVK_113P63132 956 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 MS4A2Q01362 244 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 GRIK2Q13002 908 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 CTBP1Q13363 440 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 RPS6KA2Q15349 733 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 MYLK3Q32MK0 819 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ZNF528Q3MIS6 628 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 TBCELQ5QJ74 424 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 TMTC4Q5T4D3 741 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 MANEALQ5VSG8 457 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 LCN8Q6JVE9 175 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 PPP4R4Q6NUP7 873 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ESRP1Q6NXG1 681 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 IYDQ6PHW0 289 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 CNSTQ6PJW8 725 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ZBTB49Q6ZSB9 765 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ANKS3Q6ZW76 656 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 FKBP9P1Q75LS8 142 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 SPATA19Q7Z5L4 167 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ZNF354CQ86Y25 554 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 EGFL6Q8IUX8 553 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 CEP97Q8IW35 865 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 DENND6AQ8IWF6 608 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 GPR65Q8IYL9 337 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 LILRA2Q8N149 483 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 BBS5Q8N3I7 341 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 PCDH20Q8N6Y1 951 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 RNF148Q8N7C7 305 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 LEMD2Q8NC56 503 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 NETO2Q8NC67 525 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ZNF420Q8TAQ5 688 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 PNPT1Q8TCS8 783 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 LPGAT1Q92604 370 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 EDEM1Q92611 657 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ATP6V1E2Q96A05 226 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 KCTD12Q96CX2 325 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 FEM1CQ96JP0 617 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 OMDQ99983 421 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 ERVK-6Q9BXR3 956 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 NUSAP1Q9BXS6 441 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 YTHDF1Q9BYJ9 559 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 COQ10BQ9H8M1 238 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 SP110Q9HB58 689 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 TBCCD1Q9NVR7 557 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 DLL3Q9NYJ7 618 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 CCDC167Q9P0B6 97 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 RAB23Q9ULC3 237 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 RIMKLBQ9ULI2 386 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 MRPS17Q9Y2R5 130 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 FIS1Q9Y3D6 152 aa8.57□□□□□ -1.04
CTNNA1-223ENST00000520520 TICRRQ7Z2Z1 1910 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 NOTCH4Q99466 2003 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CCDC78A2IDD5 438 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SYCE1LA8MT33 242 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 HHLA1C9JL84 531 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 NR5A2O00482 541 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 GIPC1O14908 333 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 HTRA2O43464 458 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SNAP91O60641 907 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 MAFKO60675 156 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 PAGE1O75459 146 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ECI2O75521 394 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SUPT7LO94864 414 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 OR6B1O95007 311 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 PAPLNO95428 1278 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SEC24AO95486 1093 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CYP11A1P05108 521 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 FGF1P05230 155 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 HNRNPLP14866 589 aaKnown RBP eCLIP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 RHOQP17081 205 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms