RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 HRH2P25021 359 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 ATP5DP30049 168 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 RFX2P48378 723 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 CLCNKAP51800 687 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 CDH13P55290 713 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 TAS2R38P59533 333 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 PPP2R2BQ00005 443 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 PLIN5Q00G26 463 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 ROR2Q01974 943 aaKnown RBP5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE1Q13065 139 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE4Q13068 117 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 PTPRCAPQ14761 206 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 NR1D2Q14995 579 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 CTF1Q16619 201 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 SRSF7Q16629 238 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 ATP13A5Q4VNC0 1218 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 MTX3Q5HYI7 312 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 BRAT1Q6PJG6 821 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 CENPVQ7Z7K6 275 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 CAMKVQ8NCB2 501 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 PAPD5Q8NDF8 572 aaKnown RBP5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 THAP6Q8TBB0 222 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 OIT3Q8WWZ8 545 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 SECISBP2LQ93073 1101 aaKnown RBP5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 SLC25A28Q96A46 364 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 RHBDF1Q96CC6 855 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 LRRC3BQ96PB8 259 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 CRAMP1Q96RY5 1269 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 SLC22A12Q96S37 553 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 EGFL8Q99944 293 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 MOV10L1Q9BXT6 1211 aaKnown RBP5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 GOLPH3LQ9H4A5 285 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 XAB2Q9HCS7 855 aaKnown RBP5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 LIPGQ9Y5X9 500 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 ANKRD28O15084 1053 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 RGS14O43566 566 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 SYNCRIPO60506 623 aaKnown RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 DDNO94850 711 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 SLCO2B1O94956 709 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 SIX3O95343 332 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 CH25HO95992 272 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 TMEM191BP0C7N4 346 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 NMBRP28336 390 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 CD38P28907 300 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 PCGF2P35227 344 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 RFX5P48382 616 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 AMTP48728 403 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 NPY4RP50391 375 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 PRTGQ2VWP7 1150 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 FNBP1LQ5T0N5 605 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 C18orf63Q68DL7 685 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 SUSD1Q6UWL2 747 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZNF534Q76KX8 674 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 ADCK2Q7Z695 626 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 CHERPQ8IWX8 916 aaKnown RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 PM20D2Q8IYS1 436 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 FBXO39Q8N4B4 442 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZNF548Q8NEK5 533 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 EXD1Q8NHP7 514 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 ATL1Q8WXF7 558 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 SORCS2Q96PQ0 1159 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 ABHD6Q9BV23 337 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 THUMPD3Q9BV44 507 aaKnown RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 C2orf40Q9H1Z8 148 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 CNOT10Q9H9A5 744 aaKnown RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 PCDH9Q9HC56 1237 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 EQTNQ9NQ60 294 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 MCM9Q9NXL9 1143 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 RCC2Q9P258 522 aaKnown RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 AGO1Q9UL18 857 aaKnown RBP5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 FZD10Q9ULW2 581 aa5.23□□□□□ -1.57
HMGB1P46-201ENST00000520062 SLC7A4O43246 635 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 ATP5BP06576 529 aaKnown RBP5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 ACHEP22303 614 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 KCNA5P22460 613 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 TCEA1P23193 301 aaKnown RBP5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 MCCP23508 829 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 CTSCP53634 463 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 LIMK1P53667 647 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 POLGP54098 1239 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 CDK3Q00526 305 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 GPS2Q13227 327 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZNF273Q14593 569 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 MELKQ14680 651 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 TWIST1Q15672 202 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 ODF3L2Q3SX64 289 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 KRTCAP3Q53RY4 240 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 EFHC1Q5JVL4 640 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 C6orf163Q5TEZ5 329 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 FAM69BQ5VUD6 431 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 PLA2G4FQ68DD2 849 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 TYW3Q6IPR3 259 aaKnown RBP5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 FAM198BQ6UWH4 519 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 SRRM1Q8IYB3 904 aaKnown RBP5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 IQUBQ8NA54 791 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 OR2AK2Q8NG84 335 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 BBS10Q8TAM1 723 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 TBC1D16Q8TBP0 767 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 WDR20Q8TBZ3 569 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms