RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CHERPQ8IWX8 916 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 GPD1LQ8N335 351 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 TTC39CQ8N584 583 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 LRRC52Q8N7C0 313 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 FAM46DQ8NEK8 389 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 NEK11Q8NG66 645 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 OR10Q1Q8NGQ4 319 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 FRS2Q8WU20 508 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 TAF4BQ92750 862 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 NUS1Q96E22 293 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 THAP11Q96EK4 314 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ZBTB45Q96K62 511 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 CEP295NLQ96MC4 621 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 CEP63Q96MT8 703 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 OR6C1Q96RD1 312 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 PKMYT1Q99640 499 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 BPIFA3Q9BQP9 254 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 FAM213AQ9BRX8 229 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 TRIM5Q9C035 493 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC6A16Q9GZN6 736 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 HAPLN2Q9GZV7 340 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 TSPYL1Q9H0U9 437 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 BLZF1Q9H2G9 400 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 SLCO5A1Q9H2Y9 848 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 NOD2Q9HC29 1040 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 METTL14Q9HCE5 456 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 POLD4Q9HCU8 107 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC39A2Q9NP94 309 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 RBAKQ9NYW8 714 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 LCMT1Q9UIC8 334 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 GTF3C4Q9UKN8 822 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ITGA11Q9UKX5 1188 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 STRIP2Q9ULQ0 834 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 UBQLN1Q9UMX0 589 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 NPIPA1Q9UND3 350 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 FRMD4BQ9Y2L6 1034 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ASB1Q9Y576 335 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 IGHV4-30-2A0A087WSY4 118 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 PABPN1LA6NDY0 278 aaKnown RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 LRRC10BA6NIK2 292 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 LACTBL1A8MY62 500 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 KPNA7A9QM74 516 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 PPP1R3GB7ZBB8 358 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 CYB561D2O14569 222 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 P4HA2O15460 535 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 ATP8B1O43520 1251 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 ATP9BO43861 1147 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 EXOC3O60645 756 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 PDE5AO76074 875 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 PRPF6O94906 941 aaKnown RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SEC31AO94979 1220 aaKnown RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TIAF1O95411 115 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 PAK4O96013 591 aaPredicted RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TNNC2P02585 160 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 NR3C1P04150 777 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 NHLRC4P0CG21 123 aaPredicted RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 CXCL8P10145 99 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 PYGBP11216 843 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SKILP12757 684 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 ATICP31939 592 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 PRCPP42785 496 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 MATR3P43243 847 aaKnown RBP eCLIP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 GPR3P46089 330 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 ACOT2P49753 483 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TNFSF10P50591 281 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TUBP50607 506 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 BLKP51451 505 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 IRAK1P51617 712 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 GUCY2FP51841 1108 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 HK3P52790 923 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 GSDMDP57764 484 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 IL13RA1P78552 427 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 RBP5P82980 135 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 CENPCQ03188 943 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 CYP24A1Q07973 514 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 CETN1Q12798 172 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 PNOCQ13519 176 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 RAPGEF1Q13905 1077 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TMEM132DQ14C87 1099 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SGSM1Q2NKQ1 1148 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC25A35Q3KQZ1 300 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 PIP5KL1Q5T9C9 394 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 ASPHD1Q5U4P2 390 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SNX30Q5VWJ9 437 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TDRD10Q5VZ19 366 aaKnown RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SYT10Q6XYQ8 523 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 ACAD11Q709F0 780 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 LIMS2Q7Z4I7 341 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 C17orf82Q86X59 251 aaPredicted RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SPATA2LQ8IUW3 424 aaPredicted RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 HID1Q8IV36 788 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 GRAMD1CQ8IYS0 662 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 Q8N1X5 172 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TMEM86AQ8N2M4 240 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 CBARPQ8N350 705 aaPredicted RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 AOPEPQ8N6M6 819 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TOP6BLQ8N6T0 577 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 B3GALNT2Q8NCR0 500 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 CCDC150Q8NCX0 1101 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 CXorf38Q8TB03 319 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms