RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CLPBQ9H078 707 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 P2RY12Q9H244 342 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 FGF22Q9HCT0 170 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 FBXO6Q9NRD1 293 aaPredicted RBP20.73■□□□□ 0.91
LSM6-207ENST00000515311 ARGLU1Q9NWB6 273 aaPredicted RBP20.73■□□□□ 0.91
LSM6-207ENST00000515311 SLC17A6Q9P2U8 582 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 FETUBQ9UGM5 382 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 TMEM98Q9Y2Y6 226 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 PSAT1Q9Y617 370 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 PIKFYVEQ9Y2I7 2098 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 UQCRHLA0A096LP55 91 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 F8W8V4 182 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 QSOX1O00391 747 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 CHUKO15111 745 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 NUAK1O60285 661 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 OR1I1O60431 355 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 AHSGP02765 367 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 IVLP07476 585 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 UQCRHP07919 91 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 H2AFXP16104 143 aaPredicted RBP20.72■□□□□ 0.91
LSM6-207ENST00000515311 ZNF8P17098 575 aaPredicted RBP20.72■□□□□ 0.91
LSM6-207ENST00000515311 MPLP40238 635 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 BEND6Q5SZJ8 279 aaPredicted RBP20.72■□□□□ 0.91
LSM6-207ENST00000515311 DOK6Q6PKX4 331 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 ENPP7Q6UWV6 458 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 STRA8Q7Z7C7 330 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 PARGQ86W56 976 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 SPATS2Q86XZ4 545 aaKnown RBP20.72■□□□□ 0.91
LSM6-207ENST00000515311 PPM1NQ8N819 430 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 CCDC97Q96F63 343 aaPredicted RBP20.72■□□□□ 0.91
LSM6-207ENST00000515311 MCMBPQ9BTE3 642 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 TXNDC16Q9P2K2 825 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 KLQ9UEF7 1012 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 CORO1CQ9ULV4 474 aaPredicted RBP20.72■□□□□ 0.91
LSM6-207ENST00000515311 GPR34Q9UPC5 381 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 ANKRD6Q9Y2G4 727 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 HCN4Q9Y3Q4 1203 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 PCDHB1Q9Y5F3 818 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 DGKBQ9Y6T7 804 aa20.72■□□□□ 0.91
LSM6-207ENST00000515311 A0A1B0GVT2 93 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 EXOC1LA0A1B0GW35 172 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 UBA6A0AVT1 1052 aaPredicted RBP20.71■□□□□ 0.91
LSM6-207ENST00000515311 PRSS38A1L453 326 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 DNAJC6O75061 913 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 PIAS1O75925 651 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 HAUS5O94927 633 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 ESR1P03372 595 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 RETP07949 1114 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 NUDT17P0C025 328 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 GABRB3P28472 473 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 GP5P40197 560 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 CD151P48509 253 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 POLD2P49005 469 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 CSE1LP55060 971 aaKnown RBP20.71■□□□□ 0.91
LSM6-207ENST00000515311 EFTUD2Q15029 972 aaKnown RBP eCLIP20.71■□□□□ 0.91
LSM6-207ENST00000515311 ALG11Q2TAA5 492 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 BCL7AQ4VC05 210 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 ZNF789Q5FWF6 425 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 SLC23A3Q6PIS1 610 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 CLDN19Q8N6F1 224 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 UHMK1Q8TAS1 419 aaKnown RBP20.71■□□□□ 0.91
LSM6-207ENST00000515311 CCDC77Q9BR77 488 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 ERVMER34-1Q9H9K5 563 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 CAPN10Q9HC96 672 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 GNPTGQ9UJJ9 305 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 CRYL1Q9Y2S2 319 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 COMMD10Q9Y6G5 202 aa20.71■□□□□ 0.91
LSM6-207ENST00000515311 PCDH15Q96QU1 1955 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 H3BMM5 538 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 SGTAO43765 313 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 CTSKP43235 329 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 EIF3BP55884 814 aaKnown RBP20.7■□□□□ 0.9
LSM6-207ENST00000515311 SRP54P61011 504 aaKnown RBP20.7■□□□□ 0.9
LSM6-207ENST00000515311 EIF2B5Q13144 721 aaKnown RBP20.7■□□□□ 0.9
LSM6-207ENST00000515311 CNSTQ6PJW8 725 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 ZC3HC1Q86WB0 502 aaKnown RBP20.7■□□□□ 0.9
LSM6-207ENST00000515311 SLC44A1Q8WWI5 657 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 OR1E3Q8WZA6 343 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 SGF29Q96ES7 293 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 PDXPQ96GD0 296 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 BIRC8Q96P09 236 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 ARRDC1-AS1Q9H2J1 176 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 RHOJQ9H4E5 214 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 PPCSQ9HAB8 311 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 SLC6A14Q9UN76 642 aa20.7■□□□□ 0.9
LSM6-207ENST00000515311 RASGRP1O95267 797 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 FUCA1P04066 466 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 CFIP05156 583 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 GSTM1P09488 218 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 OR56A5P0C7T3 313 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 PRLHRP49683 370 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 BLKP51451 505 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 CTSCP53634 463 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 GSTM4Q03013 218 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 PPARDQ03181 441 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 KIF19Q2TAC6 998 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 PLA2G2CQ5R387 149 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 GRTP1Q5TC63 336 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 DET1Q7L5Y6 550 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 LRRTM4Q86VH4 590 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms