RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 GLOD4Q9HC38 313 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 CPNE5Q9HCH3 593 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 MAGEE1Q9HCI5 957 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 ARFGAP3Q9NP61 516 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 THSD1Q9NS62 852 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 HAUS2Q9NVX0 235 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 UBP1Q9NZI7 540 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 PKD2L2Q9NZM6 624 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 SEPT10Q9P0V9 454 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 AMFRQ9UKV5 643 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 TMPRSS11EQ9UL52 423 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 TTC7AQ9ULT0 858 aaPredicted RBP5.77□□□□□ -1.49
RNF4-217ENST00000511892 SHOC2Q9UQ13 582 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 PRKAB1Q9Y478 270 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 SPO11Q9Y5K1 396 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 SPTBP11277 2137 aa5.77□□□□□ -1.49
RNF4-217ENST00000511892 SETXQ7Z333 2677 aaKnown RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 TRBV23OR9-2A0A075B6M9 112 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 IGHV1OR21-1A0A087WYE8 117 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 IGHV5-10-1A0A0J9YXX1 117 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 LOC285095A0A1B0GVY8 99 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 A6NCN8 305 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 RHPN2P1A8MT19 583 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CCDC188H7C350 402 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 KLK10O43240 276 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 EFSO43281 561 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 PMPCBO75439 489 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ZRANB2O95218 330 aaKnown RBP eCLIP5.76□□□□□ -1.49
RNF4-217ENST00000511892 ASMTLO95671 621 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CPNE6O95741 557 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 NDST3O95803 873 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ZNF8P17098 575 aaPredicted RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 BPIP17213 487 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ITIH1P19827 911 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 NFKB1P19838 968 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CD1CP29017 333 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ALDH4A1P30038 563 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 SLC5A2P31639 672 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CSF2RBP32927 897 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CA5AP35218 305 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ETV5P41161 510 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ACTR1BP42025 376 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 GPR3P46089 330 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 FASLGP48023 281 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 TMPRSS3P57727 454 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ACTR1AP61163 376 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CXADRP78310 365 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CLN3Q13286 438 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 EIF3IQ13347 325 aaKnown RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 COL9A2Q14055 689 aaPredicted RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 LRP8Q14114 963 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 TFDP2Q14188 446 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 C16orf72Q14CZ0 275 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 NOMO1Q15155 1222 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 AMZ1Q400G9 498 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ODF2Q5BJF6 829 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 TFDP3Q5H9I0 405 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 SIRPB2Q5JXA9 342 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 NKAIN2Q5VXU1 208 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ALS2CLQ60I27 953 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 KAZNQ674X7 775 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 FBXO38Q6PIJ6 1188 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 USP53Q70EK8 1073 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 RAB11FIP2Q7L804 512 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CHST15Q7LFX5 561 aaPredicted RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 PEX26Q7Z412 305 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 RETREG3Q86VR2 466 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ZNF761Q86XN6 746 aaPredicted RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 RCOR2Q8IZ40 523 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ZNF567Q8N184 647 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 RASGEF1CQ8N431 466 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 SFRP1Q8N474 314 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 EIF1ADQ8N9N8 165 aaKnown RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 SPATA4Q8NEY3 305 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CCHCR1Q8TD31 782 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ACTRT1Q8TDG2 376 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 SLC37A2Q8TED4 501 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 TFB1MQ8WVM0 346 aaKnown RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.76□□□□□ -1.49
RNF4-217ENST00000511892 HAUS1Q96CS2 278 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 OXNAD1Q96HP4 312 aaPredicted RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 PKNOX2Q96KN3 472 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 TMEM74Q96NL1 305 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 QKIQ96PU8 341 aaKnown RBP eCLIP5.76□□□□□ -1.49
RNF4-217ENST00000511892 UBL7Q96S82 380 aaPredicted RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 GORASP1Q9BQQ3 440 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 NUDT22Q9BRQ3 303 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 SPATA16Q9BXB7 569 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 HEMGNQ9BXL5 484 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 STRADBQ9C0K7 418 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CDH19Q9H159 772 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 OR2AG1Q9H205 316 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 CARD9Q9H257 536 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 C10orf88Q9H8K7 445 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 RDH14Q9HBH5 336 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 TMEM9Q9P0T7 183 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 VPS18Q9P253 973 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ATXN10Q9UBB4 475 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 NFKBIL1Q9UBC1 381 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms