RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 FLI1Q01543 452 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ALDH6A1Q02252 535 aaKnown RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 RELQ04864 619 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 IKZF1Q13422 519 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 KCNC3Q14003 757 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 NKX1-1Q15270 411 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SGCAQ16586 387 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SETMARQ53H47 684 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TFDP3Q5H9I0 405 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SEL1L3Q68CR1 1132 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TIGD3Q6B0B8 471 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TAF2Q6P1X5 1199 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 GK5Q6ZS86 529 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SV2AQ7L0J3 742 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 NECAB2Q7Z6G3 386 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TSPYL5Q86VY4 417 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ZSWIM9Q86XI8 627 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ADGRG3Q86Y34 549 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 AQP12AQ8IXF9 295 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TXNDC5Q8NBS9 432 aaKnown RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 CHDHQ8NE62 594 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 FEZF2Q8TBJ5 459 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SETD6Q8TBK2 473 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ZNF516Q92618 1163 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TMCO6Q96DC7 493 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 OR2A14Q96R47 310 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SPATA9Q9BWV2 254 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 APOL5Q9BWW9 433 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TRIM8Q9BZR9 551 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 DCSTAMPQ9H295 470 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SPNS1Q9H2V7 528 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 CYP4F12Q9HCS2 524 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SPATA6Q9NWH7 488 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 C14orf119Q9NWQ9 140 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 REV1Q9UBZ9 1251 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 KLHL20Q9Y2M5 609 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ATP6AP2A0A1C7CYW4 349 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 RAB19A4D1S5 217 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 PTGES3LE9PB15 166 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 LRCH4O75427 683 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 NPPAP01160 153 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 LTFP02788 710 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 CCNYL3P0C7X3 344 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 SRCP12931 536 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 MPSTP25325 297 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 TYK2P29597 1187 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 CHRNA5P30532 468 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 OXTRP30559 389 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 RFC2P35250 354 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 HNF4AP41235 474 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 RFX2P48378 723 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 SOX10P56693 466 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 ABRQ12979 859 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 GPR68Q15743 365 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 MEP1AQ16819 746 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 GLRA4Q5JXX5 417 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 FAM160B1Q5W0V3 765 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 TIGD7Q6NT04 549 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-208ENST00000511604 LRFN4Q6PJG9 635 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 RANBP10Q6VN20 620 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 OTOP1Q7RTM1 612 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 CMC1Q7Z7K0 106 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 FAM35AQ86V20 835 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 SPPL2CQ8IUH8 684 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 SPATA2LQ8IUW3 424 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-208ENST00000511604 ZNF366Q8N895 744 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 XXYLT1Q8NBI6 393 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 TRPV3Q8NET8 790 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 TMC2Q8TDI7 906 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 ATOH1Q92858 354 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-208ENST00000511604 ATXN7L3BQ96GX2 97 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 MYRFLQ96LU7 910 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 GTPBP2Q9BX10 602 aaKnown RBP7.26□□□□□ -1.25
CPNE4-208ENST00000511604 RANBP3Q9H6Z4 567 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-208ENST00000511604 RC3H2Q9HBD1 1191 aaKnown RBP7.26□□□□□ -1.25
CPNE4-208ENST00000511604 INTS10Q9NVR2 710 aaKnown RBP7.26□□□□□ -1.25
CPNE4-208ENST00000511604 HPF1Q9NWY4 346 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 MBD2Q9UBB5 411 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 DCDC2Q9UHG0 476 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 ZNF639Q9UID6 485 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 KLHL21Q9UJP4 597 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 ELF5Q9UKW6 265 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-208ENST00000511604 PRR12Q9ULL5 1215 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 PCDHGB1Q9Y5G3 927 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 A3GALT2U3KPV4 340 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 SPDYE2BA6NHP3 402 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 EFCAB9A8MZ26 197 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 SLC16A4O15374 487 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 UGT2B17O75795 530 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 SOAT2O75908 522 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 SPDYE6P0CI01 402 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 IL1R1P14778 569 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 UGT2B15P54855 530 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 DSC1Q08554 894 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 GRIK2Q13002 908 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 STX5Q13190 355 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 PICALMQ13492 652 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 DGCR6Q14129 220 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 AOC3Q16853 763 aa7.26□□□□□ -1.25
CPNE4-208ENST00000511604 AAK1Q2M2I8 961 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms