RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 DNASE1L3Q13609 305 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 R3HCC1LQ7Z5L2 792 aaKnown RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 CLEC14AQ86T13 490 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 GPR180Q86V85 440 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 KCTD13Q8WZ19 329 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 MRGPRX2Q96LB1 330 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 MEAF6Q9HAF1 191 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 AMBNQ9NP70 447 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 CD320Q9NPF0 282 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 OLAHQ9NV23 265 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 PADI4Q9UM07 663 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 MAGED1Q9Y5V3 778 aaPredicted RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 SNX8Q9Y5X2 465 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 ZSCAN9O15535 394 aaPredicted RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 KPNA6O60684 536 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 CNTN5O94779 1100 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 ANGPTL1O95841 491 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 EFNA1P20827 205 aaPredicted RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 AQP1P29972 269 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 HALP42357 657 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 FAM174BQ3ZCQ3 159 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 SPATA19Q7Z5L4 167 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 RETREG3Q86VR2 466 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 ARRDC4Q8NCT1 418 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 TMEM40Q8WWA1 233 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 ZBED3Q96IU2 234 aaPredicted RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 PAAF1Q9BRP4 392 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 WDR6Q9NNW5 1121 aaKnown RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 SCN9AQ15858 1988 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 XYLBO75191 536 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 ULK1O75385 1050 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 HCAR3P49019 387 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 DNAJB13P59910 316 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 ATP6V0D1P61421 351 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 RHOAP61586 193 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 TXNL4AP83876 142 aaKnown RBP14.75□□□□□ -0.05
USP38-202ENST00000510377 TRAF3Q13114 568 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 CARNMT1Q8N4J0 409 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 MCOLN3Q8TDD5 553 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 CMTM6Q9NX76 183 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 NME7Q9Y5B8 376 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 GMEB1Q9Y692 573 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 BMP10O95393 424 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 FGF1P05230 155 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 XPAP23025 273 aaPredicted RBP14.75□□□□□ -0.05
USP38-202ENST00000510377 APLP1P51693 650 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 HMGCS1Q01581 520 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 PACRGLQ8N7B6 248 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 RAB2BQ8WUD1 216 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 NCSTNQ92542 709 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 SLC2A13Q96QE2 648 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 ANKRD60Q9BZ19 345 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 IGSF5Q9NSI5 407 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 VPS28Q9UK41 221 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 RGS14O43566 566 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 TLR5O60602 858 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 PKMP14618 531 aaKnown RBP14.75□□□□□ -0.05
USP38-202ENST00000510377 HOXB8P17481 243 aaPredicted RBP14.75□□□□□ -0.05
USP38-202ENST00000510377 SLC11A2P49281 568 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 KPNA1P52294 538 aaPredicted RBP14.75□□□□□ -0.05
USP38-202ENST00000510377 OR4D2P58180 307 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 TMEM209Q96SK2 561 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 USP22Q9UPT9 525 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 KIF13BQ9NQT8 1826 aa14.75□□□□□ -0.05
USP38-202ENST00000510377 A0A1W2PP18 115 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 H3BMQ9 156 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 BCKDKO14874 412 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 CNOT3O75175 753 aaKnown RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 RECQL5O94762 991 aaPredicted RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 TPTEP56180 551 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 ZCCHC8Q6NZY4 707 aaKnown RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 SETD9Q8NE22 299 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 SELENOMQ8WWX9 145 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 TFAP2CQ92754 450 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 FEM1CQ96JP0 617 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 COG8Q96MW5 612 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 RANBP9Q96S59 729 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 ADGRE3Q9BY15 652 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 TOR3AQ9H497 397 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 RMND5AQ9H871 391 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 HS3ST4Q9Y661 456 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 A0A0G2JLL6 359 aaPredicted RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 ARL5CA6NH57 179 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 IQCF5A8MTL0 148 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 TMX2-CTNND1H3BSU7 103 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 MYO1DO94832 1006 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 C8BP07358 591 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 HLA-DPA1P20036 260 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 ACVRL1P37023 503 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 DEFA1P59665 94 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 DEFA3P59666 94 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 FAM171A1Q5VUB5 890 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 NANOGP8Q6NSW7 305 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 RNF19BQ6ZMZ0 732 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 DET1Q7L5Y6 550 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 PRRT2Q7Z6L0 340 aaPredicted RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 STX19Q8N4C7 294 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 ANKFN1Q8N957 763 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 MCFD2Q8NI22 146 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 APOL4Q9BPW4 351 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms