RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SRPRAP08240 638 aaKnown RBP6.75□□□□□ -1.33
CHD1-205ENST00000508756 ACCSLQ4AC99 568 aa6.75□□□□□ -1.33
CHD1-205ENST00000508756 TEX11Q8IYF3 940 aa6.75□□□□□ -1.33
CHD1-205ENST00000508756 SLC38A9Q8NBW4 561 aa6.75□□□□□ -1.33
CHD1-205ENST00000508756 SLC24A4Q8NFF2 622 aa6.75□□□□□ -1.33
CHD1-205ENST00000508756 SRSF8Q9BRL6 282 aaKnown RBP6.75□□□□□ -1.33
CHD1-205ENST00000508756 LRRC1Q9BTT6 524 aa6.75□□□□□ -1.33
CHD1-205ENST00000508756 TMEM39BQ9GZU3 492 aa6.75□□□□□ -1.33
CHD1-205ENST00000508756 BLOC1S4Q9NUP1 217 aa6.75□□□□□ -1.33
CHD1-205ENST00000508756 OGFRQ9NZT2 677 aa6.75□□□□□ -1.33
CHD1-205ENST00000508756 MARCH4Q9P2E8 410 aaPredicted RBP6.75□□□□□ -1.33
CHD1-205ENST00000508756 CTAGE9A4FU28 777 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 AP3D1O14617 1153 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 GRID2O43424 1007 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 DOK2O60496 412 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 GPC4O75487 556 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 WISP2O76076 250 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 TPPPO94811 219 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 RB1P06400 928 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 CTAGE8P0CG41 777 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 HRH2P25021 359 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 SPOCK1Q08629 439 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 KRTAP24-1Q3LI83 254 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 DCUN1D3Q8IWE4 304 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 CTAGE4Q8IX94 777 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 GSDMBQ8TAX9 411 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 PHF21AQ96BD5 680 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 GFI1Q99684 422 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 TRMT61BQ9BVS5 477 aaKnown RBP6.74□□□□□ -1.33
CHD1-205ENST00000508756 FKRPQ9H9S5 495 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 TCP11L1Q9NUJ3 509 aa6.74□□□□□ -1.33
CHD1-205ENST00000508756 FAF1Q9UNN5 650 aaPredicted RBP6.74□□□□□ -1.33
CHD1-205ENST00000508756 TMEM184BQ9Y519 407 aaPredicted RBP6.74□□□□□ -1.33
CHD1-205ENST00000508756 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 PTGES3LE9PB15 166 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 DVL1O14640 695 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 FGF17O60258 216 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 ZBED4O75132 1171 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 ACTN1P12814 892 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 ARCN1P48444 511 aaKnown RBP6.73□□□□□ -1.33
CHD1-205ENST00000508756 DVL1P1P54792 670 aaPredicted RBP6.73□□□□□ -1.33
CHD1-205ENST00000508756 RPL24P83731 157 aaKnown RBP6.73□□□□□ -1.33
CHD1-205ENST00000508756 PDSS1Q5T2R2 415 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 C4orf50Q6ZRC1 276 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 NFE4Q86UQ8 179 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 SLC5A8Q8N695 610 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 METTL27Q8N6F8 245 aaPredicted RBP6.73□□□□□ -1.33
CHD1-205ENST00000508756 RBM15BQ8NDT2 890 aaKnown RBP6.73□□□□□ -1.33
CHD1-205ENST00000508756 ALG14Q96F25 216 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 UHRF2Q96PU4 802 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 NUDCD1Q96RS6 583 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 BARD1Q99728 777 aaKnown RBP6.73□□□□□ -1.33
CHD1-205ENST00000508756 TXLNGQ9NUQ3 528 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 PAG1Q9NWQ8 432 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 CMAHPQ9Y471 501 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 PRAG1Q86YV5 1406 aa6.73□□□□□ -1.33
CHD1-205ENST00000508756 FAM172BPA6NC97 362 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 C5orf60A6NFR6 353 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 ZNF217O75362 1048 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 AHRP35869 848 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 CD81P60033 236 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 HYAL1Q12794 435 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 RARS2Q5T160 578 aaKnown RBP6.72□□□□□ -1.33
CHD1-205ENST00000508756 C19orf48Q6RUI8 117 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 LRRC8CQ8TDW0 803 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 PGAM5Q96HS1 289 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 POLG2Q9UHN1 485 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 NENFQ9UMX5 172 aa6.72□□□□□ -1.33
CHD1-205ENST00000508756 SLC22A3O75751 556 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 GM2AP17900 193 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 NR2F2P24468 414 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 PON1P27169 355 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 IRF3Q14653 427 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 MVPQ14764 893 aaKnown RBP6.71□□□□□ -1.34
CHD1-205ENST00000508756 RAB6CQ53S08 254 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 PLEKHM3Q6ZWE6 761 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 MARK2Q7KZI7 788 aaKnown RBP6.71□□□□□ -1.34
CHD1-205ENST00000508756 SLC26A9Q7LBE3 791 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 ADGRF2Q8IZF7 708 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 GCSAMQ8N6F7 178 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 OXNAD1Q96HP4 312 aaPredicted RBP6.71□□□□□ -1.34
CHD1-205ENST00000508756 NEUROD6Q96NK8 337 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 RAB6CQ9H0N0 254 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 TSPYL4Q9UJ04 414 aa6.71□□□□□ -1.34
CHD1-205ENST00000508756 DBNLQ9UJU6 430 aaKnown RBP6.71□□□□□ -1.34
CHD1-205ENST00000508756 TMEM8BA6NDV4 472 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 TMEM189-UBE2V1I3L0A0 370 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 VILLO15195 856 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 LINC01565O15544 149 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 NR1D1P20393 614 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 HOXA13P31271 388 aaPredicted RBP6.7□□□□□ -1.34
CHD1-205ENST00000508756 TERF1P54274 439 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 PHEXP78562 749 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 UBE2V1Q13404 147 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 TRMT1LQ7Z2T5 733 aaKnown RBP6.7□□□□□ -1.34
CHD1-205ENST00000508756 CEP97Q8IW35 865 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 GBGT1Q8N5D6 347 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 PPP4R1Q8TF05 950 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 RAD21L1Q9H4I0 556 aa6.7□□□□□ -1.34
CHD1-205ENST00000508756 TRPC7Q9HCX4 862 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms