RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 LRRC39Q96DD0 335 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 ERP44Q9BS26 406 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 BOCQ9BWV1 1114 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 FAM129AQ9BZQ8 928 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 TMEM168Q9H0V1 697 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 DPEP2Q9H4A9 486 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 SUDS3Q9H7L9 328 aaPredicted RBP9.03□□□□□ -0.96
NUP54-207ENST00000508583 MRPL40Q9NQ50 206 aaKnown RBP9.03□□□□□ -0.96
NUP54-207ENST00000508583 UCKL1Q9NWZ5 548 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 ZDHHC3Q9NYG2 299 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 WHRNQ9P202 907 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 KCTD3Q9Y597 815 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 MAD1L1Q9Y6D9 718 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 TRBV5-4A0A0C4DH59 114 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 TCRBV7S3A2A0A539 114 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 DCDC2BA2VCK2 349 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 OR5K4A6NMS3 321 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 GOLGA8MH3BSY2 632 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 GAPDHSO14556 408 aaPredicted RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 YY2O15391 372 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 SIGLEC6O43699 453 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 UGT1A9O60656 530 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 USP1O94782 785 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 TMEM63AO94886 807 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 GOT2P00505 430 aaKnown RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 POLBP06746 335 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 ACP5P13686 325 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 ATP1B2P14415 290 aaPredicted RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 UGT1A6P19224 532 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 UGT1A1P22309 533 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 UGT1A4P22310 534 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 ACP1P24666 158 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 UGT1A3P35503 534 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 UGT1A5P35504 534 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 ACTR1BP42025 376 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 NSG1P42857 185 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 MAGEA3P43357 314 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 POLD2P49005 469 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 ACTR1AP61163 376 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 E2F1Q01094 437 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 CTBSQ01459 385 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 C1orf61Q13536 156 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 PTPRCAPQ14761 206 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 HIF1AQ16665 826 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 GLE1Q53GS7 698 aaKnown RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 ANKRD22Q5VYY1 191 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 SLC30A9Q6PML9 568 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 PACS1Q6VY07 963 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 CEP128Q6ZU80 1094 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 ZNF534Q76KX8 674 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 CHST15Q7LFX5 561 aaPredicted RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 CAND1Q86VP6 1230 aaKnown RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 AMZ2Q86W34 360 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 LMNTD2Q8IXW0 634 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 OTUD6BQ8N6M0 293 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 BEND7Q8N7W2 519 aaPredicted RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 OR13J1Q8NGT2 312 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 STAMBPL1Q96FJ0 436 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 APOLD1Q96LR9 279 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 CLPBQ9H078 707 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 TCEAL2Q9H3H9 227 aaPredicted RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 CAAP1Q9H8G2 361 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 UGT1A7Q9HAW7 530 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 UGT1A10Q9HAW8 530 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 UGT1A8Q9HAW9 530 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 CHRAC1Q9NRG0 131 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 TREX1Q9NSU2 369 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 CATSPERZQ9NTU4 200 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 SYBUQ9NX95 663 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 TAAR2Q9P1P5 351 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 BTBD3Q9Y2F9 522 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 OAS3Q9Y6K5 1087 aaKnown RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 RPS6KL1Q9Y6S9 549 aa9.02□□□□□ -0.97
NUP54-207ENST00000508583 ARID1BQ8NFD5 2236 aaPredicted RBP9.02□□□□□ -0.97
NUP54-207ENST00000508583 MYLKQ15746 1914 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 IGLV3-16A0A075B6K0 115 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 KIR2DS5A0A0G2JLQ3 304 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 A0A0G2JNG1 304 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 CCDC162PA2VCL2 907 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 KIR2DS3K7RE56 304 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 TRIM38O00635 465 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 RAD51CO43502 376 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 MTX2O75431 263 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 RFPL3O75679 317 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 FTH1P02794 183 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 PNLIPP16233 465 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 ZNF7P17097 686 aaPredicted RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 PGAM1P18669 254 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 IDSP22304 550 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 IVDP26440 423 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 FOXN2P32314 431 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 HALP42357 657 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 PRLHRP49683 370 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 ITGA8P53708 1063 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 DRG2P55039 364 aaKnown RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 CRADDP78560 199 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 PLOD1Q02809 727 aaPredicted RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 DMPKQ09013 629 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 THOC5Q13769 683 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms