RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 IL17CQ9P0M4 197 aa12.64□□□□□ -0.39
NR1I3-225ENST00000508387 ZNF624Q9P2J8 865 aaPredicted RBP12.64□□□□□ -0.39
NR1I3-225ENST00000508387 CPNE7Q9UBL6 633 aa12.64□□□□□ -0.39
NR1I3-225ENST00000508387 ACSL6Q9UKU0 697 aa12.64□□□□□ -0.39
NR1I3-225ENST00000508387 KCTD3Q9Y597 815 aa12.64□□□□□ -0.39
NR1I3-225ENST00000508387 ARL5AQ9Y689 179 aa12.64□□□□□ -0.39
NR1I3-225ENST00000508387 OR52A4PA6NMU1 304 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 EIF4E1BA6NMX2 242 aaKnown RBP12.63□□□□□ -0.39
NR1I3-225ENST00000508387 EFCAB7A8K855 629 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 KCNN4O15554 427 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 DUX1O43812 170 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 FTCDO95954 541 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 ZNF7P17097 686 aaPredicted RBP12.63□□□□□ -0.39
NR1I3-225ENST00000508387 HMGCLP35914 325 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 SPAM1P38567 509 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 EIF3EP60228 445 aaKnown RBP12.63□□□□□ -0.39
NR1I3-225ENST00000508387 MPP3Q13368 585 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 SPARCL1Q14515 664 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 CCDC181Q5TID7 509 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 PDPK2PQ6A1A2 396 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 CCDC70Q6NSX1 233 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 TMEM71Q6P5X7 295 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 LRRTM4Q86VH4 590 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 FAM129CQ86XR2 697 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 TRAPPC5Q8IUR0 188 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 GDAP1Q8TB36 358 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 NCSTNQ92542 709 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 AHCYL2Q96HN2 611 aaKnown RBP12.63□□□□□ -0.39
NR1I3-225ENST00000508387 VPS35Q96QK1 796 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 CCNL2Q96S94 520 aaPredicted RBP12.63□□□□□ -0.39
NR1I3-225ENST00000508387 CTRCQ99895 268 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 FSD1LQ9BXM9 530 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 WDR37Q9Y2I8 494 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.63□□□□□ -0.39
NR1I3-225ENST00000508387 B3GALT1Q9Y5Z6 326 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 SLC30A1Q9Y6M5 507 aa12.63□□□□□ -0.39
NR1I3-225ENST00000508387 TCRBV7S2A1N4TA0A589 114 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 PDZK1P1A8MUH7 402 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 BTNL10A8MVZ5 291 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 ERVH48-1M5A8F1 160 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 CCL22O00626 93 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 HGSO14964 777 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 KMOO15229 486 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 DDX3YO15523 660 aaKnown RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 MTSS1O43312 755 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 CDK14O94921 469 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 RBP3P10745 1247 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 TYRP1P17643 537 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 HLA-DPA1P20036 260 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 PBLDP30039 288 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 PTPN7P35236 360 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 ADRA1AP35348 466 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 SLC19A1P41440 591 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 RWDD2BP57060 319 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 CYP4F2P78329 520 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 GPLD1P80108 840 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 TMEM115Q12893 351 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 XRCC4Q13426 336 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 SQSTM1Q13501 440 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 PEX6Q13608 980 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 CLCA4Q14CN2 919 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 TAF1BQ53T94 588 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 ANKRD20A2Q5SQ80 823 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 ANKRD20A1Q5TYW2 823 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 ANKRD20A3Q5VUR7 823 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 ANKS6Q68DC2 871 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 XKR5Q6UX68 686 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 FAM83HQ6ZRV2 1179 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 DET1Q7L5Y6 550 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 KIAA1328Q86T90 577 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 SLC9B2Q86UD5 537 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 DTX1Q86Y01 620 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 ZNF843Q8N446 348 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 BEND7Q8N7W2 519 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 BMPERQ8N8U9 685 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 RASGEF1AQ8N9B8 481 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 GPR150Q8NGU9 434 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 OR10G6Q8NH81 332 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 SNRNP27Q8WVK2 155 aaKnown RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 TMEM159Q96B96 161 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 VAT1Q99536 393 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 BAG1Q99933 345 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 APMAPQ9HDC9 416 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 RAD18Q9NS91 495 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 FKBPLQ9UIM3 349 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 R3HDM2Q9Y2K5 976 aaKnown RBP12.62□□□□□ -0.39
NR1I3-225ENST00000508387 CAPN6Q9Y6Q1 641 aa12.62□□□□□ -0.39
NR1I3-225ENST00000508387 GLYATL1P3A0A0U1RQE8 302 aa12.61□□□□□ -0.39
NR1I3-225ENST00000508387 CCDC66A2RUB6 948 aa12.61□□□□□ -0.39
NR1I3-225ENST00000508387 OR2AG2A6NM03 316 aa12.61□□□□□ -0.39
NR1I3-225ENST00000508387 LEPRP48357 1165 aaKnown RBP12.61□□□□□ -0.39
NR1I3-225ENST00000508387 CLCNKAP51800 687 aa12.61□□□□□ -0.39
NR1I3-225ENST00000508387 GEMP55040 296 aa12.61□□□□□ -0.39
NR1I3-225ENST00000508387 GDF10P55107 478 aa12.61□□□□□ -0.39
NR1I3-225ENST00000508387 COPS2P61201 443 aa12.61□□□□□ -0.39
NR1I3-225ENST00000508387 PPP1CAP62136 330 aa12.61□□□□□ -0.39
NR1I3-225ENST00000508387 RHDQ02161 417 aa12.61□□□□□ -0.39
NR1I3-225ENST00000508387 MSLNQ13421 630 aaPredicted RBP12.61□□□□□ -0.39
NR1I3-225ENST00000508387 CLPPQ16740 277 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms