RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 GOLGA8TH3BQL2 631 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 GRID2O43424 1007 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 GDF9O60383 454 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 ATP1B2P14415 290 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 MSH3P20585 1137 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 OGNP20774 298 aaKnown RBP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 DGKAP23743 735 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 TNFRSF8P28908 595 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 MAGEA4P43358 317 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 LIMK1P53667 647 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 GPX6P59796 221 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 SLC14A1Q13336 389 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 HLTFQ14527 1009 aaKnown RBP eCLIP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 TYSND1Q2T9J0 566 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 AASDHQ4L235 1098 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 AARS2Q5JTZ9 985 aaKnown RBP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 MRNIPQ6NTE8 343 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 NEPROQ6NW34 567 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 CEP128Q6ZU80 1094 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 CYS1Q717R9 158 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 MARK2Q7KZI7 788 aaKnown RBP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 RD3Q7Z3Z2 195 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 C11orf96Q7Z7L8 435 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 KCNMB4Q86W47 210 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 CILP2Q8IUL8 1156 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF547Q8IVP9 402 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 SLC25A45Q8N413 288 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 GSDMBQ8TAX9 411 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 GPBAR1Q8TDU6 330 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 SCG3Q8WXD2 468 aaKnown RBP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 CERS2Q96G23 380 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 CFAP36Q96G28 342 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 TCF12Q99081 682 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 FMO2Q99518 471 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 LRRC61Q9BV99 259 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 BOCQ9BWV1 1114 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 SLC13A1Q9BZW2 595 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 ZCCHC2Q9C0B9 1178 aaKnown RBP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 CLPBQ9H078 707 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 TMEM168Q9H0V1 697 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 CARS2Q9HA77 564 aaKnown RBP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 C20orf96Q9NUD7 363 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-210ENST00000506767 MOCS1Q9NZB8 636 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 SPASTQ9UBP0 616 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 MOSPD1Q9UJG1 213 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 NFU1Q9UMS0 254 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 ST14Q9Y5Y6 855 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 CSNK1G3Q9Y6M4 447 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 SPTBN4Q9H254 2564 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 KMOO15229 486 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 OR1I1O60431 355 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 GSTA2P09210 222 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 GIMD1P0DJR0 217 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 RALBP11234 206 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 SSTR1P30872 391 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 AKT1P31749 480 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 PPARGP37231 505 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-210ENST00000506767 NSG1P42857 185 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 GNPDA1P46926 289 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 TTPAP49638 278 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 CTSCP53634 463 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 IL9RQ01113 521 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 GTF2H3Q13889 308 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 BCL7AQ4VC05 210 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 HSP90AA5PQ58FG0 334 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 PRRT3Q5FWE3 981 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 TRMT10BQ6PF06 316 aaKnown RBP12.67□□□□□ -0.38
TCOF1-210ENST00000506767 TMEM220Q6QAJ8 160 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 SDCCAG8Q86SQ7 713 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-210ENST00000506767 LDB1Q86U70 411 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-210ENST00000506767 LRRTM4Q86VH4 590 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 CCDC25Q86WR0 208 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 NRROSQ86YC3 692 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 GALNT13Q8IUC8 556 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 CNTN4Q8IWV2 1026 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 PALM2Q8IXS6 379 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 SDR16C5Q8N3Y7 309 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 FSTL5Q8N475 847 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF548Q8NEK5 533 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-210ENST00000506767 CALML6Q8TD86 181 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 SGF29Q96ES7 293 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 DCUN1D1Q96GG9 259 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF514Q96K75 400 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-210ENST00000506767 LINC00615Q96LM1 132 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-210ENST00000506767 C9orf72Q96LT7 481 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 TTC25Q96NG3 672 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 OR2M4Q96R27 311 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 TTC1Q99614 292 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 P2RY12Q9H244 342 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 LRRC4CQ9HCJ2 640 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 UCKL1Q9NWZ5 548 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 ZNHIT2Q9UHR6 403 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 PRKAB1Q9Y478 270 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 DNMT3AQ9Y6K1 912 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-210ENST00000506767 PRSS21Q9Y6M0 314 aa12.67□□□□□ -0.38
TCOF1-210ENST00000506767 TDRD6O60522 2096 aaKnown RBP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 PRR19A6NJB7 356 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 OR2AG2A6NM03 316 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms