RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CDK16Q00536 496 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 ACVR1Q04771 509 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 HES3Q5TGS1 186 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 LRRC8BQ6P9F7 803 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 PIANPQ8IYJ0 282 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 NXPE1Q8N323 547 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 SLCO2A1Q92959 643 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 NAT6Q93015 286 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 CCDC74AQ96AQ1 378 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 TBC1D29Q9UFV1 150 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 PCYOX1Q9UHG3 505 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 CRLS1Q9UJA2 301 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 RIMKLBQ9ULI2 386 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 NEUROG3Q9Y4Z2 214 aa17.99■□□□□ 0.47
PDLIM7-216ENST00000506537 WDFY3Q8IZQ1 3526 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 CCDC162PA2VCL2 907 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 FAM221BA6H8Z2 402 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 A6NCN8 305 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 KMOO15229 486 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 SGTAO43765 313 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 ZNF7P17097 686 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 MGAT1P26572 445 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 CASQ1P31415 396 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 AKT1P31749 480 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 GTF2H3Q13889 308 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 SKIDA1Q1XH10 827 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 ZRANB3Q5FWF4 1079 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 CAND1Q86VP6 1230 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 TRAPPC5Q8IUR0 188 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 KLHL7Q8IXQ5 586 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 ULK4Q96C45 1275 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 CCDC3Q9BQI4 270 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 TIMM29Q9BSF4 260 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 ZCCHC2Q9C0B9 1178 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 KLC4Q9NSK0 619 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 SYBUQ9NX95 663 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 SLC30A1Q9Y6M5 507 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 RNF215Q9Y6U7 377 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 EPG5Q9HCE0 2579 aa17.98■□□□□ 0.47
PDLIM7-216ENST00000506537 OR2AG2A6NM03 316 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 AVILO75366 819 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 MSH3P20585 1137 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 FOXN2P32314 431 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 CLCNKAP51800 687 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 E2F1Q01094 437 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 CACNG1Q06432 222 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 PTK6Q13882 451 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 PPP1R7Q15435 360 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 INSCQ1MX18 579 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 GPR33Q49SQ1 333 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 PCID2Q5JVF3 399 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 CDCP2Q5VXM1 449 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 TMEM220Q6QAJ8 160 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 DET1Q7L5Y6 550 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 SERPINA9Q86WD7 417 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 ARL14Q8N4G2 192 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 PPHLN1Q8NEY8 458 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 MAPK15Q8TD08 544 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 HDAC10Q969S8 669 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 TTC25Q96NG3 672 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 IL22Q9GZX6 179 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 CHRAC1Q9NRG0 131 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 DNAJC16Q9Y2G8 782 aa17.97■□□□□ 0.47
PDLIM7-216ENST00000506537 IGLV3-16A0A075B6K0 115 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 GLB1P16278 677 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 ACRV1P26436 265 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 PAFAH1B1P43034 410 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 NPY2RP49146 381 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 LAMB3Q13751 1172 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 DBN1Q16643 649 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 CCNI2Q6ZMN8 369 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 NLRP9Q7RTR0 991 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 TMPRSS12Q86WS5 348 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 MPP5Q8N3R9 675 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 GALNT15Q8N3T1 639 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 SFRP1Q8N474 314 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 BEND7Q8N7W2 519 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 NAT8LQ8N9F0 302 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 OR6C4Q8NGE1 309 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 SLC37A2Q8TED4 501 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 SGF29Q96ES7 293 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 C16orf45Q96MC5 204 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 TMEM121BQ9BXQ6 578 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 OSGEPL1Q9H4B0 414 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 PRDM8Q9NQV8 689 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 TREX1Q9NSU2 369 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 ZDHHC3Q9NYG2 299 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 BFARQ9NZS9 450 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 RNF14Q9UBS8 474 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 MSRB2Q9Y3D2 182 aa17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 TPRP12270 2363 aaKnown RBP17.96■□□□□ 0.47
PDLIM7-216ENST00000506537 FREM2Q5SZK8 3169 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 TRBV23OR9-2A0A075B6M9 112 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 GOLGA8MH3BSY2 632 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 NUDT21O43809 227 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 SNX2O60749 519 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 GOT2P00505 430 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 NMBRP28336 390 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 BCL7AQ4VC05 210 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 FNBP1LQ5T0N5 605 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms