RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 RFX6Q8HWS3 928 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 OR8K1Q8NGG5 319 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 SPATA16Q9BXB7 569 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 APMAPQ9HDC9 416 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 ARFGAP3Q9NP61 516 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 VPS18Q9P253 973 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 NENFQ9UMX5 172 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 MAP4K5Q9Y4K4 846 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 CRYBG3Q68DQ2 2970 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 ABCA12Q86UK0 2595 aa15.82■□□□□ 0.12
PDLIM7-213ENST00000505074 FADS2P1A8MWK0 482 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 ANKRD66B4E2M5 251 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 POLR1CO15160 346 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 DLGAP3O95886 979 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 PIRTP0C851 137 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 F8A1P23610 371 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 HNRNPH3P31942 346 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 PMS2P54278 862 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 DYNLT1P63172 113 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 PPIDQ08752 370 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 ZNF569Q5MCW4 686 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 HENMT1Q5T8I9 393 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 LYSMD3Q7Z3D4 306 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 ARHGAP22Q7Z5H3 698 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 PHYKPLQ8IUZ5 450 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 SFRP1Q8N474 314 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 SLC35G2Q8TBE7 412 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 AGAP3Q96P47 875 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 LYSMD1Q96S90 227 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 OSGEPL1Q9H4B0 414 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 SHOC2Q9UQ13 582 aa15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 PCYT1BQ9Y5K3 369 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-213ENST00000505074 PPP1R12AO14974 1030 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 DNAJC6O75061 913 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 CLDN1O95832 211 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 EML2O95834 649 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 PDGFAP04085 211 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 MMP2P08253 660 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 FURINP09958 794 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 SLC2A4P14672 509 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 PTMSP20962 102 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 FASLGP48023 281 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 IFI35P80217 286 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 PDK1Q15118 436 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 EIF2S3LQ2VIR3 472 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 PLA2G4EQ3MJ16 856 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 WDR74Q6RFH5 385 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 NPNTQ6UXI9 565 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 SLC9B2Q86UD5 537 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 NT5DC3Q86UY8 548 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 RAVER1Q8IY67 606 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 PLD5Q8N7P1 536 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 PRR7Q8TB68 274 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 NCSTNQ92542 709 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 CCDC42Q96M95 316 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 WDR24Q96S15 920 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 GPR63Q9BZJ6 419 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 ZFYVE1Q9HBF4 777 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 SPTLC3Q9NUV7 552 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 TBC1D29Q9UFV1 150 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 KLHL3Q9UH77 587 aa15.8■□□□□ 0.12
PDLIM7-213ENST00000505074 HIVEP3Q5T1R4 2406 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 SSU72P8A0A1W2PR75 194 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 CDC14CA4D256 554 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 RGSL1A5PLK6 1076 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 GRID2O43424 1007 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 KATNA1O75449 491 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 MTA2O94776 668 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 SLC25A14O95258 325 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 ZFXP17010 805 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 ZNF648Q5T619 568 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 CCDC70Q6NSX1 233 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 CRTC3Q6UUV7 619 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 B4GALNT4Q76KP1 1039 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 APLFQ8IW19 511 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 RHOT2Q8IXI1 618 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 CNTD1Q8N815 330 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 SH3KBP1Q96B97 665 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 DNAJC7Q99615 494 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 HERPUD2Q9BSE4 406 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 BRD8Q9H0E9 1235 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 OR2AG1Q9H205 316 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 RMI1Q9H9A7 625 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 ABHD10Q9NUJ1 306 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 KCND3Q9UK17 655 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 CROTQ9UKG9 612 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 CNOT6Q9ULM6 557 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 C2CD3Q4AC94 2353 aa15.79■□□□□ 0.12
PDLIM7-213ENST00000505074 SPOPO43791 374 aa15.78■□□□□ 0.12
PDLIM7-213ENST00000505074 ARHGAP25P42331 645 aa15.78■□□□□ 0.12
PDLIM7-213ENST00000505074 INSCQ1MX18 579 aa15.78■□□□□ 0.12
PDLIM7-213ENST00000505074 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-213ENST00000505074 C6orf15Q6UXA7 325 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-213ENST00000505074 TRIM48Q8IWZ4 208 aa15.78■□□□□ 0.12
PDLIM7-213ENST00000505074 CHP1Q99653 195 aa15.78■□□□□ 0.12
PDLIM7-213ENST00000505074 SLC29A3Q9BZD2 475 aa15.78■□□□□ 0.12
PDLIM7-213ENST00000505074 ULBP3Q9BZM4 244 aa15.78■□□□□ 0.12
PDLIM7-213ENST00000505074 TWSG1Q9GZX9 223 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms