RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 AMBPP02760 352 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 OPN1MWP04001 364 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 EIF2S1P05198 315 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 RSPH10BP0C881 870 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 HNRNPCL4P0DMR1 293 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 OPN1MW2P0DN77 364 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 OPN1MW3P0DN78 364 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 GZMAP12544 262 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARF4P18085 180 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 IL10P22301 178 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMOD1P28289 359 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPM1AP35813 382 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATP6V1E1P36543 226 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 HSD17B2P37059 387 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 HALP42357 657 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 MTHFRP42898 656 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 RAD52P43351 418 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 PSMC4P43686 418 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 MTNR1AP48039 350 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CENPAP49450 140 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ETV1P50549 477 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 MVDP53602 400 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CLNS1AP54105 237 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 HSD17B7P56937 341 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 LMO4P61968 165 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 OLR1P78380 273 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 MRPS15P82914 257 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARHGAP8P85298 464 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 GALNT1Q10472 559 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF155Q12901 538 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 PDCLQ13371 301 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 DYNC1I2Q13409 638 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 PICALMQ13492 652 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CUL4BQ13620 913 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 THOC5Q13769 683 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 BYSLQ13895 437 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 OASLQ15646 514 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 STK11Q15831 433 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 RPE65Q16518 533 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ME3Q16798 604 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CFAP221Q4G0U5 840 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATP13A5Q4VNC0 1218 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 LRRC23Q53EV4 343 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 KRBOX4Q5JUW0 171 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 HECTD3Q5T447 861 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 IL31Q6EBC2 164 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 NAPEPLDQ6IQ20 393 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 LIN54Q6MZP7 749 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TATDN1Q6P1N9 297 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 GGT6Q6P531 493 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 C11orf88Q6PI97 169 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CORO6Q6QEF8 472 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 C4orf50Q6ZRC1 276 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 IKBIPQ70UQ0 350 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 RSRC2Q7L4I2 434 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 BNIPLQ7Z465 357 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 IQCA1Q86XH1 822 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 EPHX4Q8IUS5 362 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 GHDCQ8N2G8 530 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 METTL27Q8N6F8 245 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 KBTBD3Q8NAB2 608 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 NAXEQ8NCW5 288 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 SCAMP5Q8TAC9 235 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TAS1R2Q8TE23 839 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 SGCDQ92629 289 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 SAAL1Q96ER3 474 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 GIMAP5Q96F15 307 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMEM19Q96HH6 336 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARL5BQ96KC2 179 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPM1MQ96MI6 270 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRAPPC9Q96Q05 1148 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ALS2CR12Q96Q35 445 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 YME1L1Q96TA2 773 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CSF3RQ99062 836 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 PI4K2AQ9BTU6 479 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 UBXN6Q9BZV1 441 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 PABPC3Q9H361 631 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 VCPKMTQ9H867 229 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 GRPEL1Q9HAV7 217 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 FBRSL1Q9HCM7 1045 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 PTPRHQ9HD43 1115 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 NLRC4Q9NPP4 1024 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 GPR108Q9NPR9 543 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATP8A2Q9NTI2 1148 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TBC1D22BQ9NU19 505 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 HPF1Q9NWY4 346 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 MIS18AQ9NYP9 233 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 IFT80Q9P2H3 777 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 POLKQ9UBT6 870 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TAGLN3Q9UI15 199 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 KCND3Q9UK17 655 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF148Q9UQR1 794 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 MTF2Q9Y483 593 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 DAAM1Q9Y4D1 1078 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CLDN16Q9Y5I7 305 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATP6V1DQ9Y5K8 247 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CACNA1FO60840 1977 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ERICH3Q5RHP9 1530 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 NPATQ14207 1427 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms