RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 EMC1Q8N766 993 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 FOXD4L4Q8WXT5 416 aaPredicted RBP12.28□□□□□ -0.44
LSM6-204ENST00000504181 NRGNQ92686 78 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 SNX21Q969T3 373 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 LRFN5Q96NI6 719 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 GBP5Q96PP8 586 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 MAP3K3Q99759 626 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 SPOCK3Q9BQ16 436 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 CINPQ9BW66 212 aaPredicted RBP12.28□□□□□ -0.44
LSM6-204ENST00000504181 DLL4Q9NR61 685 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 KCND1Q9NSA2 647 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 ZNF624Q9P2J8 865 aaPredicted RBP12.28□□□□□ -0.44
LSM6-204ENST00000504181 EPHA6Q9UF33 1036 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 SIK3Q9Y2K2 1263 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 CPAMD8Q8IZJ3 1885 aa12.27□□□□□ -0.44
LSM6-204ENST00000504181 CCDC78A2IDD5 438 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 PEX12O00623 359 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 PRAMEF11O60813 436 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 PALMO75781 387 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 CLDN14O95500 239 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 CYP2A6P11509 494 aaPredicted RBP12.27□□□□□ -0.45
LSM6-204ENST00000504181 EPHB2P29323 1055 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 DNAJA1P31689 397 aaKnown RBP12.27□□□□□ -0.45
LSM6-204ENST00000504181 KRT9P35527 623 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 SCNN1AP37088 669 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 CA7P43166 264 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 TUBB4BP68371 445 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 CSNK1G2P78368 415 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 TUBB2AQ13885 445 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 GPR18Q14330 331 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 SEPT7Q16181 437 aaKnown RBP12.27□□□□□ -0.45
LSM6-204ENST00000504181 PTCHD3Q3KNS1 767 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 B3GNTL1Q67FW5 361 aaPredicted RBP12.27□□□□□ -0.45
LSM6-204ENST00000504181 PLEKHA7Q6IQ23 1121 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 TMEM207Q6UWW9 146 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 PYROXD2Q8N2H3 581 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 COG1Q8WTW3 980 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 CPT1BQ92523 772 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 ZNF501Q96CX3 271 aaPredicted RBP12.27□□□□□ -0.45
LSM6-204ENST00000504181 MAGEB10Q96LZ2 347 aaPredicted RBP12.27□□□□□ -0.45
LSM6-204ENST00000504181 PCMTD1Q96MG8 357 aaPredicted RBP12.27□□□□□ -0.45
LSM6-204ENST00000504181 AGAP3Q96P47 875 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 IP6K3Q96PC2 410 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 TUBB2BQ9BVA1 445 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 CXXC4Q9H2H0 198 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 VPS18Q9P253 973 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 SEMA5BQ9P283 1151 aa12.27□□□□□ -0.45
LSM6-204ENST00000504181 RPH3AQ9Y2J0 694 aaPredicted RBP12.27□□□□□ -0.45
LSM6-204ENST00000504181 WASH4PA8MWX3 477 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 DDX3YO15523 660 aaKnown RBP12.26□□□□□ -0.45
LSM6-204ENST00000504181 RORAP35398 523 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 GABRB2P47870 512 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 ARCN1P48444 511 aaKnown RBP12.26□□□□□ -0.45
LSM6-204ENST00000504181 ABRQ12979 859 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 PRKD1Q15139 912 aaPredicted RBP12.26□□□□□ -0.45
LSM6-204ENST00000504181 ZNF324BQ6AW86 544 aaPredicted RBP12.26□□□□□ -0.45
LSM6-204ENST00000504181 EXD1Q8NHP7 514 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 C18orf8Q96DM3 657 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 FOXC2Q99958 501 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 RAB33BQ9H082 229 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 METTL5Q9NRN9 209 aaKnown RBP12.26□□□□□ -0.45
LSM6-204ENST00000504181 KLC4Q9NSK0 619 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 PCMTD2Q9NV79 361 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 TMEM59LQ9UK28 342 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 PCDHGC4Q9Y5F7 938 aa12.26□□□□□ -0.45
LSM6-204ENST00000504181 ATRQ13535 2644 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 HRNRQ86YZ3 2850 aaPredicted RBP12.25□□□□□ -0.45
LSM6-204ENST00000504181 UNC5CO95185 931 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 IGHEP01854 428 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 CTPS1P17812 591 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 SMSP52788 366 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 SOX8P57073 446 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 HSD11B2P80365 405 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 PLA2G4EQ3MJ16 856 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 FAAH2Q6GMR7 532 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 UMODL1-AS1Q8N2C9 162 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 D2HGDHQ8N465 521 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 LRRN4CLQ8ND94 238 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 NR4A3Q92570 626 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
LSM6-204ENST00000504181 CELF6Q96J87 481 aaKnown RBP12.25□□□□□ -0.45
LSM6-204ENST00000504181 SMR3AQ99954 134 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 TMEM121Q9BTD3 319 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 RIOK2Q9BVS4 552 aaKnown RBP12.25□□□□□ -0.45
LSM6-204ENST00000504181 ENKD1Q9H0I2 346 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 ATP13A2Q9NQ11 1180 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 POT1Q9NUX5 634 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 P4HTMQ9NXG6 502 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 BTRCQ9Y297 605 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 PADI2Q9Y2J8 665 aa12.25□□□□□ -0.45
LSM6-204ENST00000504181 UBA6A0AVT1 1052 aaPredicted RBP12.24□□□□□ -0.45
LSM6-204ENST00000504181 OR52A4PA6NMU1 304 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 PDZK1P1A8MUH7 402 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 C9J4A7 227 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 HTRA2O43464 458 aaPredicted RBP12.24□□□□□ -0.45
LSM6-204ENST00000504181 ALOX12BO75342 701 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 KLF7O75840 302 aaPredicted RBP12.24□□□□□ -0.45
LSM6-204ENST00000504181 LCA5LO95447 670 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 PYGLP06737 847 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 FOSL1P15407 271 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms