RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 KRT1P04264 644 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 CEACAM5P06731 702 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 PNLIPP16233 465 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 LHCGRP22888 699 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 KELP23276 732 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 NFKBIAP25963 317 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ARCN1P48444 511 aaKnown RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 KRTAP10-9P60411 292 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 GCNT1Q02742 428 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 RAD51Q06609 339 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 SEMA5AQ13591 1074 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 TRA2AQ13595 282 aaKnown RBP eCLIP3.59□□□□□ -1.83
USP46-205ENST00000504078 ATP1A4Q13733 1029 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 CYTH1Q15438 398 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 CHRNA6Q15825 494 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 UGP2Q16851 508 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ZXDCQ2QGD7 858 aaPredicted RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 ZRANB3Q5FWF4 1079 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 EFHC1Q5JVL4 640 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 FAM182AQ5T1J6 154 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ZFYVE27Q5T4F4 411 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ARMC12Q5T9G4 340 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 NAA35Q5VZE5 725 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ALKBH2Q6NS38 261 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 IRGCQ6NXR0 463 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 PNCKQ6P2M8 343 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 CRTC3Q6UUV7 619 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 SEZ6L2Q6UXD5 910 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 LIPIQ6XZB0 460 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 KRBA2Q6ZNG9 492 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ARHGAP36Q6ZRI8 547 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 BEND5Q7L4P6 421 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 HSD11B1LQ7Z5J1 315 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ZSCAN30Q86W11 494 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 C17orf82Q86X59 251 aaPredicted RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 CREBRFQ8IUR6 639 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 TMEM151BQ8IW70 566 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.59□□□□□ -1.83
USP46-205ENST00000504078 JOSD2Q8TAC2 188 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 GPT2Q8TD30 523 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 TMEM174Q8WUU8 243 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 RSC1A1Q92681 617 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 INPP5DQ92835 1189 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ISG20Q96AZ6 181 aaKnown RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 FAXDC2Q96IV6 333 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 LURAP1Q96LR2 239 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 TEFMQ96QE5 360 aaKnown RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 AGAP2Q99490 1192 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 EFHD1Q9BUP0 239 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 MLPHQ9BV36 600 aaPredicted RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 SPRY4Q9C004 299 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ILKAPQ9H0C8 392 aaPredicted RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 BRD8Q9H0E9 1235 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ING2Q9H160 280 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ABCG8Q9H221 673 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 GSX1Q9H4S2 264 aaPredicted RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 PHPT1Q9NRX4 125 aaPredicted RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 SAMSN1Q9NSI8 373 aaKnown RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 ASNSD1Q9NWL6 643 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 PPP4R2Q9NY27 417 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 OGFRQ9NZT2 677 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 CRIM1Q9NZV1 1036 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 TRIM10Q9UDY6 481 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 CNOT8Q9UFF9 292 aaKnown RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 HPCAL4Q9UM19 191 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 OSGIN2Q9Y236 505 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 HPSEQ9Y251 543 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 MFHAS1Q9Y4C4 1052 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ABCA12Q86UK0 2595 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ARHGEF17Q96PE2 2063 aaPredicted RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 CELSR2Q9HCU4 2923 aa3.59□□□□□ -1.84
USP46-205ENST00000504078 F8P00451 2351 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 NPIPB15A6NHN6 443 aaPredicted RBP3.58□□□□□ -1.84
USP46-205ENST00000504078 A6NHS1 94 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 NPIPB6E9PJ23 425 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 DFFAO00273 331 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 E2F3O00716 465 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 TOR1BO14657 336 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 LRRTM2O43300 516 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 KDELR3O43731 214 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 DPM1O60762 260 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 LRCH4O75427 683 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 SPAG6O75602 509 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 ASMTLO95671 621 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 SOD1P00441 154 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 ATP1A1P05023 1023 aaKnown RBP3.58□□□□□ -1.84
USP46-205ENST00000504078 GLI1P08151 1106 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 PLEKP08567 350 aaPredicted RBP3.58□□□□□ -1.84
USP46-205ENST00000504078 EBLN1P0CF75 366 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 SLC9A1P19634 815 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 EPHB2P29323 1055 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 SERPINA4P29622 427 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 OTX2P32243 289 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 MAN1A1P33908 653 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 GARSP41250 739 aaKnown RBP3.58□□□□□ -1.84
USP46-205ENST00000504078 GPR3P46089 330 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 GPR1P46091 355 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 GLRBP48167 497 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 MAPKAPK2P49137 400 aa3.58□□□□□ -1.84
USP46-205ENST00000504078 GEMIN4P57678 1058 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms