RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CUL3Q13618 768 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PTPRNQ16849 979 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 UNC50Q53HI1 259 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 MPP7Q5T2T1 576 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 ARMC12Q5T9G4 340 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PAQR3Q6TCH7 311 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 AFAP1L2Q8N4X5 818 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 CFAP61Q8NHU2 1237 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 RHEBL1Q8TAI7 183 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 USP13Q92995 863 aaPredicted RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 EXT2Q93063 718 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 ACDQ96AP0 544 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 MYO19Q96H55 970 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 CATSPER2Q96P56 530 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 GCNAQ96QF7 691 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 RTKNQ9BST9 563 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 TM6SF2Q9BZW4 377 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 TNFRSF12AQ9NP84 129 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PLK2Q9NYY3 685 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 FAM50BQ9Y247 325 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 ZNF711Q9Y462 761 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 DENND4CQ5VZ89 1909 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 A0A0U1RQS6 177 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PFDN6O15212 129 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 MAP3K7O43318 606 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 KRT36O76013 467 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PGLSO95336 258 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 S100A6P06703 90 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PKMP14618 531 aaKnown RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 CTPS1P17812 591 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 ADSLP30566 484 aaPredicted RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 PPARGP37231 505 aaPredicted RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 TTPAP49638 278 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 CCNG1P51959 295 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 RELQ04864 619 aaPredicted RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 TRMT5Q32P41 509 aaKnown RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 ZRANB3Q5FWF4 1079 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 C6orf163Q5TEZ5 329 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 TMEM198Q66K66 360 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 THOC7Q6I9Y2 204 aaKnown RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 TPGS1Q6ZTW0 290 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 NECAB2Q7Z6G3 386 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PTGR2Q8N8N7 351 aaPredicted RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 PIH1D2Q8WWB5 315 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 CLP1Q92989 425 aaKnown RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 BIRC8Q96P09 236 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 ATOH8Q96SQ7 321 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 DERL2Q9GZP9 239 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 IL17CQ9P0M4 197 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 CLEC4EQ9ULY5 219 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 ARHGAP26Q9UNA1 814 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 FIS1Q9Y3D6 152 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 OAS3Q9Y6K5 1087 aaKnown RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 LCHNA4D1U4 455 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 UBXN8O00124 270 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 LEFTY2O00292 366 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 SUPT7LO94864 414 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 PRAMEF12O95522 483 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 THRAP10827 490 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 HERVK_113P63132 956 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 CD83Q01151 205 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 BTKQ06187 659 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 RAD51Q06609 339 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 RIPOR1Q6ZS17 1223 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 CAMK1DQ8IU85 385 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 FIBINQ8TAL6 211 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 SLC22A17Q8WUG5 538 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 STMN2Q93045 179 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 KIAA1191Q96A73 305 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 PANX3Q96QZ0 392 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 GPR21Q99679 349 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 ERVK-6Q9BXR3 956 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 SLC46A2Q9BY10 475 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 GPR63Q9BZJ6 419 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 MAGEE1Q9HCI5 957 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 CD93Q9NPY3 652 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 ASAH2Q9NR71 780 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 SIRT5Q9NXA8 310 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 FNDC3AQ9Y2H6 1198 aaKnown RBP11.47□□□□□ -0.57
USP46-204ENST00000503060 TIMM22Q9Y584 194 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 BPTFQ12830 3046 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.47□□□□□ -0.57
USP46-204ENST00000503060 RGSL1A5PLK6 1076 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 PDLIM1O00151 329 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 UBFD1O14562 309 aaKnown RBP11.47□□□□□ -0.57
USP46-204ENST00000503060 CCL16O15467 120 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 EPN2O95208 641 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 MTHFD2P13995 350 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 CD1EP15812 388 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 PFKLP17858 780 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 MAPK1P28482 360 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 CD70P32970 193 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 CSNK1DP48730 415 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 ATP6V0D1P61421 351 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 XIAPP98170 497 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 AARS2Q5JTZ9 985 aaKnown RBP11.47□□□□□ -0.57
USP46-204ENST00000503060 LYSMD3Q7Z3D4 306 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 RAB44Q7Z6P3 723 aaPredicted RBP11.47□□□□□ -0.57
USP46-204ENST00000503060 ZER1Q7Z7L7 766 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms