RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	CA5A	P35218	305 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	PCK1	P35558	622 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	ACTN2	P35609	894 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	POLD2	P49005	469 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	HCAR3	P49019	387 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	PEX5	P50542	639 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	SUOX	P51687	545 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	THOP1	P52888	689 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	MAZ	P56270	477 aa	Known RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	ERVPABLB-1	P60509	514 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	SRP54	P61011	504 aa	Known RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	AP1S1	P61966	158 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	CXADR	P78310	365 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	B4GALNT1	Q00973	533 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	PPARD	Q03181	441 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	GBE1	Q04446	702 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	ZFP36L1	Q07352	338 aa	Known RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	NIPAL4	Q0D2K0	466 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	ELP6	Q0PNE2	266 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	GALNT2	Q10471	571 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	SLC10A2	Q12908	348 aa	Predicted RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	SGCG	Q13326	291 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	DPYSL3	Q14195	570 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	TGIF1	Q15583	401 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	ASTE1	Q2TB18	679 aa	Predicted RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	LINC00303	Q3SY05	128 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	PPP6R3	Q5H9R7	873 aa	Predicted RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	KIAA1614	Q5VZ46	1190 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	CAVIN1	Q6NZI2	390 aa	Known RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	DCUN1D2	Q6PH85	259 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	BRAT1	Q6PJG6	821 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	SASS6	Q6UVJ0	657 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	ENPP7	Q6UWV6	458 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	RBM44	Q6ZP01	1051 aa	Known RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	MICALCL	Q6ZW33	695 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	TRIM74	Q86UV6	250 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	LUZP1	Q86V48	1076 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	HEATR4	Q86WZ0	1026 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	PSTK	Q8IV42	348 aa	Known RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	ZNF248	Q8NDW4	579 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	ARRDC2	Q8TBH0	407 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	EID2B	Q96D98	161 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	NUDCD1	Q96RS6	583 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	NUDT22	Q9BRQ3	303 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	CINP	Q9BW66	212 aa	Predicted RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	TEX101	Q9BY14	249 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	SP110	Q9HB58	689 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	SPATS2L	Q9NUQ6	558 aa	Known RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	PARVA	Q9NVD7	372 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	GFOD1	Q9NXC2	390 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	DTL	Q9NZJ0	730 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	TMEM9	Q9P0T7	183 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	KL	Q9UEF7	1012 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	ACSL6	Q9UKU0	697 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	CNOT6	Q9ULM6	557 aa	Known RBP	5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	PADI4	Q9UM07	663 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	PPIL1	Q9Y3C6	166 aa		5.49	□□□□□ -1.53
UBE3C-208	ENST00000497368	FLNB	O75369	2602 aa	Known RBP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	UTP20	O75691	2785 aa	Known RBP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	CCDC187	A0A096LP49	1063 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368		A0A1W2PQJ5	194 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	ARHGAP42	A6NI28	874 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	C3orf70	A6NLC5	250 aa	Predicted RBP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	FADS2P1	A8MWK0	482 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368		B4DGG1	531 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	EIF3CL	B5ME19	914 aa	Known RBP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368		K7ENP7	123 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	NEMP1	O14524	444 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	TOR1B	O14657	336 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	B4GAT1	O43505	415 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	SOCS5	O75159	536 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	PALM	O75781	387 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	RASGRP1	O95267	797 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	PGLS	O95336	258 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	MBD3	O95983	291 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	CP	P00450	1065 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	FGF1	P05230	155 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	RPLP0	P05388	317 aa	Known RBP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	ELFN1	P0C7U0	828 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	IMPDH2	P12268	514 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	MYCLP1	P12525	358 aa	Predicted RBP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	CTPS1	P17812	591 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	RPL10	P27635	214 aa	Known RBP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	TEAD1	P28347	426 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	SERPINA4	P29622	427 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	VIPR1	P32241	457 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	UGT1A5	P35504	534 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	CDK3	Q00526	305 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	DSC2	Q02487	901 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	NSUN2	Q08J23	767 aa	Known RBP eCLIP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	CCDC15	Q0P6D6	951 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	ZBTB17	Q13105	803 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	LY6D	Q14210	128 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	RFTN1	Q14699	578 aa	Predicted RBP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	PAFAH1B3	Q15102	231 aa	Known RBP	5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	C14orf28	Q4W4Y0	310 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	FAXC	Q5TGI0	409 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	SPECC1L	Q69YQ0	1117 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	PNCK	Q6P2M8	343 aa		5.48	□□□□□ -1.53
UBE3C-208	ENST00000497368	INO80C	Q6PI98	192 aa	Predicted RBP	5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms