RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PLA2G4FQ68DD2 849 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 NIPA1Q7RTP0 329 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 PRSS48Q7RTY5 328 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 CMTR2Q8IYT2 770 aaKnown RBP8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 CENPLQ8N0S6 344 aaPredicted RBP8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 SPAG16Q8N0X2 631 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 LILRB2Q8N423 598 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 C3orf58Q8NDZ4 430 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 CLHC1Q8NHS4 586 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 SLC5A11Q8WWX8 675 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 SLC9A7Q96T83 725 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 SEC22CQ9BRL7 303 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 DPCDQ9BVM2 203 aaPredicted RBP8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 C20orf27Q9GZN8 174 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 SP110Q9HB58 689 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 MCUBQ9NWR8 336 aa8.13□□□□□ -1.11
CRNKL1-205ENST00000496549 F8VP50 259 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 WWP2O00308 870 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 MYL12BO14950 172 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 TP73O15350 636 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 XPNPEP2O43895 674 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 C1QBP02746 253 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 MYL12AP19105 171 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 LIG4P49917 911 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 MAZP56270 477 aaKnown RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 MCCD1P59942 119 aaPredicted RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 GCNT1Q02742 428 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 ADAM15Q13444 863 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 GRAPQ13588 217 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 GRK1Q15835 563 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 CYBRD1Q53TN4 286 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 GNASQ5JWF2 1037 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 VARS2Q5ST30 1063 aaKnown RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 ABRAQ8N0Z2 381 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 FAM45AQ8TCE6 357 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 TAS1R2Q8TE23 839 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 VAT1Q99536 393 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 ADPGKQ9BRR6 497 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 EIF3KQ9UBQ5 218 aaKnown RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 COPS3Q9UNS2 423 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 PCDHA2Q9Y5H9 948 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 LOC100130705A0A1B0GUX0 176 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 FABP12A6NFH5 140 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 PDGFRAP16234 1089 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 CDKN2BP42772 138 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 GZMKP49863 264 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 CSNK2BP67870 215 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 ECM1Q16610 540 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 DUSP6Q16828 381 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 CDO1Q16878 200 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 ADPRMQ3LIE5 342 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 SBK1Q52WX2 424 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 PDZD4Q76G19 769 aaPredicted RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 METTL23Q86XA0 190 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 TAGAPQ8N103 731 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 CPA6Q8N4T0 437 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 TMIEQ8NEW7 156 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 TMC2Q8TDI7 906 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 TMBIM1Q969X1 311 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 EGLN2Q96KS0 407 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 NGRNQ9NPE2 291 aaKnown RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 A3GALT2U3KPV4 340 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 PXDNQ92626 1479 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 A0A0J9YYE9 177 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 TCRBV7S3A2A0A539 114 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 PIPSLA2A3N6 862 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 OR6C65A6NJZ3 312 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 NT5C1B-RDH14C9J2C7 533 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 M0R233 179 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 HPRP00739 348 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 CYP11A1P05108 521 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 IL6P05231 212 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 JUNP05412 331 aaKnown RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 ANXA6P08133 673 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 MYL3P08590 195 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 FMO3P31513 532 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 ARL4AP40617 200 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 IFITM3Q01628 133 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 CSTF1Q05048 431 aaKnown RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 TUBB3Q13509 450 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 DPP8Q6V1X1 898 aaPredicted RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 ZNF782Q6ZMW2 699 aaPredicted RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 CMC1Q7Z7K0 106 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 GLRX5Q86SX6 157 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 REM2Q8IYK8 340 aaPredicted RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 LPCAT1Q8NF37 534 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 LXNQ9BS40 222 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 TRAF4Q9BUZ4 470 aaPredicted RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 PLA2G12BQ9BX93 195 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 MMP28Q9H239 520 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 DTLQ9NZJ0 730 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 GMPR2Q9P2T1 348 aaKnown RBP8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 PCDHGB3Q9Y5G1 929 aa8.12□□□□□ -1.11
CRNKL1-205ENST00000496549 E9PAM4 449 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 STX16O14662 325 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 B4GALT4O60513 344 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 RASGRP1O95267 797 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CHRNGP07510 517 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 ALAS2P22557 587 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 KDELR1P24390 212 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms