RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 F7P08709 466 aaPredicted RBP16.13■□□□□ 0.17
CBX4-204ENST00000495122 TPBGLP0DKB5 382 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 PABPC1P11940 636 aaKnown RBP16.13■□□□□ 0.17
CBX4-204ENST00000495122 SRCP12931 536 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 PKMP14618 531 aaKnown RBP16.13■□□□□ 0.17
CBX4-204ENST00000495122 CD1DP15813 335 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 TFEBP19484 476 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 RPS3P23396 243 aaKnown RBP eCLIP16.13■□□□□ 0.17
CBX4-204ENST00000495122 ABL2P42684 1182 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 NUMBP49757 651 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 NAGLUP54802 743 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 SEMA3AQ14563 771 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 PUM1Q14671 1186 aaKnown RBP eCLIP16.13■□□□□ 0.17
CBX4-204ENST00000495122 CRY1Q16526 586 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 RSPO4Q2I0M5 234 aaPredicted RBP16.13■□□□□ 0.17
CBX4-204ENST00000495122 GAB4Q2WGN9 574 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 GPR33Q49SQ1 333 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 FBXO43Q4G163 708 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 ATXN7L2Q5T6C5 722 aaPredicted RBP16.13■□□□□ 0.17
CBX4-204ENST00000495122 GRAMD4Q6IC98 578 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 TPGS1Q6ZTW0 290 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 RAB44Q7Z6P3 723 aaPredicted RBP16.13■□□□□ 0.17
CBX4-204ENST00000495122 PARP9Q8IXQ6 854 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 AHI1Q8N157 1196 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 TXNDC5Q8NBS9 432 aaKnown RBP16.13■□□□□ 0.17
CBX4-204ENST00000495122 CFAP61Q8NHU2 1237 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 WFIKKN2Q8TEU8 576 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 ECHDC3Q96DC8 303 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 BTBD10Q9BSF8 475 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 CCDC106Q9BWC9 280 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 C1orf21Q9H246 121 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 ZFYVE1Q9HBF4 777 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 PNPOQ9NVS9 261 aa16.13■□□□□ 0.17
CBX4-204ENST00000495122 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.13■□□□□ 0.17
CBX4-204ENST00000495122 INTS6Q9UL03 887 aaKnown RBP16.13■□□□□ 0.17
CBX4-204ENST00000495122 A8MT66 165 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 LRP3O75074 770 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 ATG13O75143 517 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 RHOBTB1O94844 696 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 PIGNO95427 931 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 NFATC1O95644 943 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 MT-CO1P00395 513 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 ASLP04424 464 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 RETP07949 1114 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 ITGALP20701 1170 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 IMPDH1P20839 514 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 ARRB2P32121 409 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 IRX1P78414 480 aaPredicted RBP16.12■□□□□ 0.17
CBX4-204ENST00000495122 XIAPP98170 497 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 MYLK3Q32MK0 819 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 DNAL1Q4LDG9 190 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 ARL13AQ5H913 290 aaPredicted RBP16.12■□□□□ 0.17
CBX4-204ENST00000495122 ACAD11Q709F0 780 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 ISCA2Q86U28 154 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 ZNF781Q8N8C0 355 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 STAG3L4Q8TBR4 150 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 KIAA1191Q96A73 305 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 BBS2Q9BXC9 721 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 LINC00597Q9H2U6 94 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 ARL8BQ9NVJ2 186 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 EVLQ9UI08 416 aaPredicted RBP16.12■□□□□ 0.17
CBX4-204ENST00000495122 FKBPLQ9UIM3 349 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 CRYL1Q9Y2S2 319 aa16.12■□□□□ 0.17
CBX4-204ENST00000495122 ADAMTS9Q9P2N4 1935 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 TRBV5-4A0A0C4DH59 114 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 CCDC163A0A0D9SF12 145 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 UBA6A0AVT1 1052 aaPredicted RBP16.11■□□□□ 0.17
CBX4-204ENST00000495122 CCL22O00626 93 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 HGSO14964 777 aaPredicted RBP16.11■□□□□ 0.17
CBX4-204ENST00000495122 SMAD6O43541 496 aaKnown RBP16.11■□□□□ 0.17
CBX4-204ENST00000495122 BUD23O43709 281 aaKnown RBP16.11■□□□□ 0.17
CBX4-204ENST00000495122 KERAO60938 352 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 ZNF821O75541 412 aaPredicted RBP16.11■□□□□ 0.17
CBX4-204ENST00000495122 CBX6O95503 412 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 HLA-FP30511 346 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 SLC8A1P32418 973 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 GMPRP36959 345 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 OPRD1P41143 372 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 POLR2LP62875 67 aaKnown RBP16.11■□□□□ 0.17
CBX4-204ENST00000495122 KCNJ2P63252 427 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 ECT2LQ008S8 904 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 TIAL1Q01085 375 aaKnown RBP eCLIP16.11■□□□□ 0.17
CBX4-204ENST00000495122 SPEM2Q0P670 501 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 PEX6Q13608 980 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 SNCBQ16143 134 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 FUT11Q495W5 492 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 CARD16Q5EG05 197 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 FBXW10Q5XX13 1052 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 FRMD7Q6ZUT3 714 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 USP45Q70EL2 814 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 DGLUCYQ7Z3D6 616 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 MAVSQ7Z434 540 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 SNX20Q7Z614 316 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 TMPRSS6Q8IU80 811 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 RPLP0P6Q8NHW5 317 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 DTX3LQ8TDB6 740 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 HCAR2Q8TDS4 363 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 CMTM5Q96DZ9 223 aa16.11■□□□□ 0.17
CBX4-204ENST00000495122 PDLIM5Q96HC4 596 aaKnown RBP16.11■□□□□ 0.17
CBX4-204ENST00000495122 MCCC1Q96RQ3 725 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms