RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 RBFAQ8N0V3 343 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 PLAC1Q9HBJ0 212 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 PARD6AQ9NPB6 346 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 APOBEC3BQ9UH17 382 aaKnown RBP14.39□□□□□ -0.11
BRCA1-223ENST00000494123 GPSM3Q9Y4H4 160 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 DMDP11532 3685 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 OTOGLQ3ZCN5 2332 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 BPTFQ12830 3046 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 SCAMP1O15126 338 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 DNAJC6O75061 913 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 IVLP07476 585 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 MYBL2P10244 700 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 CTSEP14091 401 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 ZNF7P17097 686 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-223ENST00000494123 PHBP35232 272 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 NSG1P42857 185 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 HNRNPKP61978 463 aaKnown RBP eCLIP14.38□□□□□ -0.11
BRCA1-223ENST00000494123 VSNL1P62760 191 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 MGAT5Q09328 741 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 FRG1Q14331 258 aaKnown RBP14.38□□□□□ -0.11
BRCA1-223ENST00000494123 KYNUQ16719 465 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 AASDHQ4L235 1098 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-223ENST00000494123 WDR93Q6P2C0 686 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 TRMT10BQ6PF06 316 aaKnown RBP14.38□□□□□ -0.11
BRCA1-223ENST00000494123 CRTC3Q6UUV7 619 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 CCNI2Q6ZMN8 369 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-223ENST00000494123 PRR23CQ6ZRP0 262 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 CILP2Q8IUL8 1156 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 TRAPPC5Q8IUR0 188 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 RELL1Q8IUW5 271 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 MINDY1Q8N5J2 469 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 PNPLA1Q8N8W4 532 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 ZNF514Q96K75 400 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-223ENST00000494123 TCF12Q99081 682 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 EDEM2Q9BV94 578 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 BOCQ9BWV1 1114 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 CDC42EP4Q9H3Q1 356 aaKnown RBP14.38□□□□□ -0.11
BRCA1-223ENST00000494123 LRRC4CQ9HCJ2 640 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 ZFATQ9P243 1243 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 PNMA8BQ9ULN7 279 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-223ENST00000494123 VPS9D1Q9Y2B5 631 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 DGKBQ9Y6T7 804 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 KNL1Q8NG31 2342 aa14.38□□□□□ -0.11
BRCA1-223ENST00000494123 IGLV3-16A0A075B6K0 115 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 UBA6A0AVT1 1052 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 OR2AG2A6NM03 316 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 YKT6O15498 198 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 GRID2O43424 1007 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 FAM153BP0C7A2 387 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 ATP1B2P14415 290 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 STX2P32856 288 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 SLC1A2P43004 574 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 CCT8P50990 548 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 GPX6P59796 221 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 IL9RQ01113 521 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 CTBP1Q13363 440 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 TYSND1Q2T9J0 566 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 FAM153CQ494X1 144 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 KCTD16Q68DU8 428 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 TMEM220Q6QAJ8 160 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 PACS1Q6VY07 963 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 LRRTM4Q86VH4 590 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 DENND6AQ8IWF6 608 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 RASGEF1AQ8N9B8 481 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 OR2I1PQ8NGU4 316 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 CDKL2Q92772 493 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 SGF29Q96ES7 293 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 SCARF2Q96GP6 870 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 OR2M4Q96R27 311 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 CLPBQ9H078 707 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 MOCS1Q9NZB8 636 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 NINJ2Q9NZG7 142 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 SPASTQ9UBP0 616 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 KLF15Q9UIH9 416 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 PRKAB1Q9Y478 270 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 TDRD6O60522 2096 aaKnown RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 ZFHX2Q9C0A1 2572 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 A0A1B0GTQ1 180 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 TCRBV9S1A1TA0A576 114 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 F8W8V4 182 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 CHUKO15111 745 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 KMOO15229 486 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 OR1I1O60431 355 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 GFRA3O60609 400 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 SDC3O75056 442 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 ACSL3O95573 720 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 FUCA1P04066 466 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 TUBBP07437 444 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 RXRGP48443 463 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 B4GALNT1Q00973 533 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 TCEA2Q15560 299 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 PYCR3Q53H96 274 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 PRRT3Q5FWE3 981 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 CHST15Q7LFX5 561 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 NAT14Q8WUY8 206 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 SCG3Q8WXD2 468 aaKnown RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 CCDC97Q96F63 343 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 PARD6BQ9BYG5 372 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 TCEAL2Q9H3H9 227 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 IL21RQ9HBE5 538 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms