RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 DNTTIP2Q5QJE6 756 aaKnown RBP6.08□□□□□ -1.44
SMC2-205ENST00000493955 ZDHHC20Q5W0Z9 365 aa6.08□□□□□ -1.44
SMC2-205ENST00000493955 RND1Q92730 232 aa6.08□□□□□ -1.44
SMC2-205ENST00000493955 SLC25A28Q96A46 364 aa6.08□□□□□ -1.44
SMC2-205ENST00000493955 RHBDF1Q96CC6 855 aa6.08□□□□□ -1.44
SMC2-205ENST00000493955 URB1-AS1Q96HZ7 61 aa6.08□□□□□ -1.44
SMC2-205ENST00000493955 GPATCH1Q9BRR8 931 aaKnown RBP6.08□□□□□ -1.44
SMC2-205ENST00000493955 DESI2Q9BSY9 194 aa6.08□□□□□ -1.44
SMC2-205ENST00000493955 SPRY4Q9C004 299 aa6.08□□□□□ -1.44
SMC2-205ENST00000493955 POMT1Q9Y6A1 747 aa6.08□□□□□ -1.44
SMC2-205ENST00000493955 ATXN2Q99700 1313 aaKnown RBP6.07□□□□□ -1.44
SMC2-205ENST00000493955 TRAV34A0A0B4J273 112 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 ARHGEF37A1IGU5 675 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 BECN2A8MW95 431 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 KCNN4O15554 427 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 ZNF217O75362 1048 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 FGF2P09038 288 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 LINGO3P0C6S8 592 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 PRF1P14222 555 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 UGT1A1P22309 533 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 HRH2P25021 359 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 ATP5DP30049 168 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 HOXC8P31273 242 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 MMP13P45452 471 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 RFX5P48382 616 aaPredicted RBP6.07□□□□□ -1.44
SMC2-205ENST00000493955 NUDT6P53370 316 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 TAS2R38P59533 333 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 EZH2Q15910 746 aaKnown RBP6.07□□□□□ -1.44
SMC2-205ENST00000493955 FSCBQ5H9T9 825 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 KRT39Q6A163 491 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 TYW3Q6IPR3 259 aaKnown RBP6.07□□□□□ -1.44
SMC2-205ENST00000493955 C11orf88Q6PI97 169 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 ADCK2Q7Z695 626 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 ZNF595Q8IYB9 648 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 EMC1Q8N766 993 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 NANOGP1Q8N7R0 232 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 IQUBQ8NA54 791 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 SLC38A9Q8NBW4 561 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 ZNF548Q8NEK5 533 aaPredicted RBP6.07□□□□□ -1.44
SMC2-205ENST00000493955 OR2AK2Q8NG84 335 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 WDR20Q8TBZ3 569 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 OIT3Q8WWZ8 545 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 NXNL1Q96CM4 212 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 MS4A10Q96PG2 267 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 GFI1Q99684 422 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 SEMA3CQ99985 751 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 TMEM79Q9BSE2 394 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 ZBTB40Q9NUA8 1239 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 LIPGQ9Y5X9 500 aa6.07□□□□□ -1.44
SMC2-205ENST00000493955 A0A0B4J293 547 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 FAM90A26D6RGX4 464 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 CCDC188H7C350 402 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 DDNO94850 711 aaPredicted RBP6.06□□□□□ -1.44
SMC2-205ENST00000493955 CELF2O95319 508 aaKnown RBP6.06□□□□□ -1.44
SMC2-205ENST00000493955 CH25HO95992 272 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 PENKP01210 267 aaPredicted RBP6.06□□□□□ -1.44
SMC2-205ENST00000493955 TNFRSF1BP20333 461 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 ACHEP22303 614 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 PCGF2P35227 344 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 KRT2P35908 639 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 MXI1P50539 228 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 SRSF4Q08170 494 aaKnown RBP6.06□□□□□ -1.44
SMC2-205ENST00000493955 SRSF7Q16629 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMC2-205ENST00000493955 PRTGQ2VWP7 1150 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 ZNF626Q68DY1 528 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 IRF2BP2Q7Z5L9 587 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 TMEM173Q86WV6 379 aaPredicted RBP6.06□□□□□ -1.44
SMC2-205ENST00000493955 TBC1D16Q8TBP0 767 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 FNBP1Q96RU3 617 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 CRAMP1Q96RY5 1269 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 ABHD6Q9BV23 337 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 C2orf40Q9H1Z8 148 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 FBXL2Q9UKC9 423 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 B3GALT5Q9Y2C3 310 aa6.06□□□□□ -1.44
SMC2-205ENST00000493955 RPS10-NUDT3A0A1W2PQS6 291 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 GOLGA6L9A6NEM1 432 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 TMEM189-UBE2V1I3L0A0 370 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 J3QR06 171 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 ANKRD28O15084 1053 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 SLC16A5O15375 505 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 RGS14O43566 566 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 SPRY3O43610 288 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 SP100P23497 879 aaPredicted RBP6.05□□□□□ -1.44
SMC2-205ENST00000493955 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
SMC2-205ENST00000493955 SNRPEP62304 92 aaKnown RBP6.05□□□□□ -1.44
SMC2-205ENST00000493955 UBE2V1Q13404 147 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 ZNF273Q14593 569 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 PTPRCAPQ14761 206 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 SMN1Q16637 294 aaKnown RBP6.05□□□□□ -1.44
SMC2-205ENST00000493955 AMZ1Q400G9 498 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 MTX3Q5HYI7 312 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 KCNT1Q5JUK3 1230 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 FNBP1LQ5T0N5 605 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 C18orf63Q68DL7 685 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 PPP1R21Q6ZMI0 780 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 ZNF534Q76KX8 674 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 PM20D2Q8IYS1 436 aa6.05□□□□□ -1.44
SMC2-205ENST00000493955 MAML2Q8IZL2 1156 aaPredicted RBP6.05□□□□□ -1.44
SMC2-205ENST00000493955 CCAR2Q8N163 923 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms